Gene RPC_1748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1748 
Symbol 
ID3972245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1900364 
End bp1901728 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content67% 
IMG OID637924861 
Producttwin-arginine translocation pathway signal 
Protein accessionYP_531626 
Protein GI90423256 
COG category 
COG ID 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.166004 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTCA GCCGCCGTCA CCTCCTCAAC GCCGCAGCCT TTGCAGCCGG CGCGCTGGCT 
TTACCAAGTA AGCCCGCCCG CGCGGCGCCG CTGACCTCGT CGCTCGGGCG CGACGCCAGC
CAATACGGCG TGCGGCCGAA CAGTCCGGAC GATCAGACCA GAGCCTTGCA GCGCGCCATC
GACGACGCTG CGCGGGCGCA GACACCGCTG GCGCTGCCGC CGGGGGTCTA TCGCACCGGC
CCGCTGATGC TGCCGAACGG CGCGCAGCTG ATCGGTGTGC GCGGCGCGAC GCGGCTGCTG
TTCAACGGCG GCCGCTCGCT GCTGGAAAGC CAGGGCGGCA ACGCCGTGGA GCTGAGCGGC
CTCACGCTCG ATGGCGCGCA GATCAAGTTG CCGCAACGTC GCGGCCTGGT GCATTGCCAG
CAGGGCCGTG AACTTCGCAT CACGCAATGC ACAATCGCCA ATTCCGGCGG CAACGGCATC
TGGCTCGACA ATATCGCCGG CGACATCAGC GATAACGGCT TCAGTAACAT CGCCACCACC
GGCATCGTCT CGTTCGACGC CCAGGGCTTG ATCGTGGCGC GCAACAGCAT TTTGGGCACC
AACGACAACG GCATCGAGAT CCTGCGCAGC GCGCTCGGCG ACGACGGCAC GCAAGTTCTC
GACAACCGCA TCGAGGACAT CAAGGCCGGC CCCGGCGGCT CCGGGCAATA CGGCAACGCC
ATCAACGCGT TTCGCGCCGG CAACGTCGTC GTGCGCGGCA ACCGCATCAA GAACTGCGAT
TACTCCGCGG TGCGCGGCAA TTCCGCCTCC AACATCCAGA TCACCGGCAA CAGCGTCAGC
AATGTCCGCG AGGTGGCGCT GTATTCCGAA TTTGCCTTCG AAGGCGCGGT GATCGCCAAC
AACACCGTCA ACGGCGCCGC GGTCGGCGTC TCGGTGTGCA ATTTCAACGA AGGCGGCCGG
CTCAGCGTGG TGCAGGGCAA TCTGATCCGC AACCTCACGC CGAAGCGGCC GATCGGCACC
GCGCCGGATG ACGACGCCGG CATCGGCATC TATGTCGAGG CCGATACTGC GGTCACCGGC
AATGTGGTCG AGAACGCGCC GTCGTTCGGC ATCGTCGCCG GCTGGGGCCG CTATCTGCGC
GACGTCGCGA TCAGCGGCAA TGTGATCCGC AACGCCTTTG TCGGCATCGG GGTGTCGGTG
GCGGATGGCG CCGGCACCGC GCTGGTCGGC AACAATGTGA TCTCGGAGAC GCCGCGCGGC
GCGGTGGTCG GGCTCGATCA TGCCCGGCCG GTGACGCCGG ATCTGGCAGC GCCCGGCGCA
GCCAAGTTCG CTCAGGTGGT GATGGGGATC AATGCGGCGC GGTGA
 
Protein sequence
MPLSRRHLLN AAAFAAGALA LPSKPARAAP LTSSLGRDAS QYGVRPNSPD DQTRALQRAI 
DDAARAQTPL ALPPGVYRTG PLMLPNGAQL IGVRGATRLL FNGGRSLLES QGGNAVELSG
LTLDGAQIKL PQRRGLVHCQ QGRELRITQC TIANSGGNGI WLDNIAGDIS DNGFSNIATT
GIVSFDAQGL IVARNSILGT NDNGIEILRS ALGDDGTQVL DNRIEDIKAG PGGSGQYGNA
INAFRAGNVV VRGNRIKNCD YSAVRGNSAS NIQITGNSVS NVREVALYSE FAFEGAVIAN
NTVNGAAVGV SVCNFNEGGR LSVVQGNLIR NLTPKRPIGT APDDDAGIGI YVEADTAVTG
NVVENAPSFG IVAGWGRYLR DVAISGNVIR NAFVGIGVSV ADGAGTALVG NNVISETPRG
AVVGLDHARP VTPDLAAPGA AKFAQVVMGI NAAR