| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1740 |
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| Symbol | |
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| ID | 3972452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1892954 |
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| End bp | 1893499 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637924853 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_531618 |
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| Protein GI | 90423248 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0463014 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCAGGGAC GTGACGAGGA ATGGACCGGG TTGATGCGGT CGGCCAACGC CGGCGACAGC
GCGGCCTATC ATCGTCTGCT GAAGGCGGTC ACGCCGGTGC TGCGCGCCGC GGCGCGTCGC
GGTCTGGCCC GCGCCGGCCA GCCGATCGAT CAGTCCGAGG ACATCGTGCA GGATATTCTG
TTGGCCGTGC ACCTGAAGAA ACACACCTGG GACGCCAGCG CGCCATTCGC GCCGTGGCTG
TTCGCGATCG CCCGCAACAA GCTGATCGAC GCGCTGCGCC GCCGCGGCCG CCGGGTGTTC
GTCAATATCG ATGATTTCGC CGAGACGATC CCGAGCGCGC CGGCCGCCGA AACGCTGCCC
ACAAGCGAGA TCGCCAGCCA TCTGGAGACC CTGCCGGCGC GGCAGCGCGA CGTGCTGCAG
GCGATCGCGG TCGACAGCGC ATCGATCAAG ACCACCGCGG CCAAGCTCGC GATCACCGAG
GGCGCGGTGC GGGTCGCCCT GCATCGCGGC CTGTCGCGGC TCGCCAGCAA ATTGCGGACG
GAATGA
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| Protein sequence | MQGRDEEWTG LMRSANAGDS AAYHRLLKAV TPVLRAAARR GLARAGQPID QSEDIVQDIL
LAVHLKKHTW DASAPFAPWL FAIARNKLID ALRRRGRRVF VNIDDFAETI PSAPAAETLP
TSEIASHLET LPARQRDVLQ AIAVDSASIK TTAAKLAITE GAVRVALHRG LSRLASKLRT
E
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