| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1729 |
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| Symbol | |
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| ID | 3972441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1878940 |
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| End bp | 1880112 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637924842 |
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| Product | peptidase M20D, amidohydrolase |
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| Protein accession | YP_531607 |
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| Protein GI | 90423237 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0022862 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCCGTGA TCAACCGCGT CGCCGATCTG CAGCCTGACA TCGTGGCCTG GCGCCGGGAT
CTTCATGCGC ATCCGGAACT GATGTACGAG GTGCATCGCA CCGCGGCCTT CGTGGCGGAC
CGGCTGCGCG AATTCGGCTG TGACGAGGTC GTCACCGGCA TCGGCCGCAC CGGCGTGGTC
GGCGTGATCA AGGGCCGCAA GCCGGCTGAC GGCAGCGAGG TTCGCACCAT CGCGCTGCGC
GCCGACATGG ACGCTCTGCC GATCACCGAA GCCAACGATC TGCCCTACGC CTCGCAGACG
CCCGGGCTGA TGCACGCCTG CGGCCATGAC GGCCACACCG CGATGTTGCT CGGCGCCGCG
CGCTATCTCG CCGAGACCCG CAATTTTGCC GGCGACGCCG TGGTGATTTT CCAGCCGGCC
GAGGAGGGCG GCGCCGGCGC CGCGGCGATG ATCGCGGACG GGTTGATGGA GCGCTTCGCG
ATCGACCAGG TCTACGGTAT GCACAACGGC CCCGGCCTGC CGGTCGGCTG CTTCGCGCTG
CGGCAGGGAC CGATCATGGC TTCGACGGAT TCCATCGACA TCAAGATCAA TGGCGTCGGC
GGCCACGCCG CGCGGCCGCA CAAATGCGTC GATTCGGTGC TGGTCGGCGC GCAGCTGGTC
ACCGCGCTGC AATCGATCGT GTCGCGTAGC GTCGATCCGC TGGAGTCCGC GGTGCTGTCG
ATCTGCGAGT TCCACGCCGG CAATGCCCGC AACGTGATTC CGGCGTCCGC GGAGCTGAAG
GGCACCGTGC GTACGCTCAC TGCGGACGTC CGCGACCTCG CCGAACAGCG GGTGCGCGAG
GTGGTGGCTG GCGTCGCCAC GATGACCGGC GCCACCATCG ATTTGGTCTA TGATCGCGGC
TACCCAGTGC TGGTCAACCA CGCGGCGCAG ACCGAAGCGG CCAGCCGCGT CGCCCGCGCC
ATCGCTGGCG ACGGCAACGT CCACGACATG CCGCCGCTGA TGGGCGCCGA GGATTTTGCC
TATATGCTGG AAGCCCGCCC GGGCGCCTTC ATCTTCGTCG GCAATGGCGA CAGCGCCGGG
CTGCATCACC CGGCCTACAA TTTCAATGAC GACGCCATCG TCTATGGAAC ATCCTATTGG
ATCAAGCTGG TCGAGACCAC GCTGGCGGCC TGA
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| Protein sequence | MPVINRVADL QPDIVAWRRD LHAHPELMYE VHRTAAFVAD RLREFGCDEV VTGIGRTGVV
GVIKGRKPAD GSEVRTIALR ADMDALPITE ANDLPYASQT PGLMHACGHD GHTAMLLGAA
RYLAETRNFA GDAVVIFQPA EEGGAGAAAM IADGLMERFA IDQVYGMHNG PGLPVGCFAL
RQGPIMASTD SIDIKINGVG GHAARPHKCV DSVLVGAQLV TALQSIVSRS VDPLESAVLS
ICEFHAGNAR NVIPASAELK GTVRTLTADV RDLAEQRVRE VVAGVATMTG ATIDLVYDRG
YPVLVNHAAQ TEAASRVARA IAGDGNVHDM PPLMGAEDFA YMLEARPGAF IFVGNGDSAG
LHHPAYNFND DAIVYGTSYW IKLVETTLAA
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