| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1728 |
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| Symbol | |
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| ID | 3972381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1877213 |
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| End bp | 1878604 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637924841 |
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| Product | aminotransferase class-III |
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| Protein accession | YP_531606 |
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| Protein GI | 90423236 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00289082 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCCTATC CGAATTTAGA CGTATCCCAG ATGTTCGCGG ATCGGGAGGC GCAGCGCAGT
TCCATGCACG CGCGCCATCT CAACGAACAA CTCGTGAGAG TACTGAAGAC CATCGGCTAT
GATGTCGGCT TCCAGCGCGG GTCCGGGCAG TATCTGTTCG ATCGCGACGG TGCACGGTAC
CTGGATTTGC TGAGCGGGTT CGGGGTATTC GCGATCGGGC GCAACCATCC GGTGCTGCGC
CAAGCGCTGA AGAGCGTGCT CGACGCCGAG ATGCCGAATC TCGTGCAACT CGACGTTTCC
ACTTTGGCGG GCATATTGGC CGAGCGATTG CTCGAATACA TGCCGTATCT CGACAAGGTG
TTCTTCGCCA ATTCCGGCGC CGAGAGCGTC GAGGCGGCGA TCAAATTCGC CCGCGTCGCC
ACCGGCCGGA CCGGCATCGT CAATTGCGAA CACAGCTATC ACGGCCTGAC CTACGGCGCG
TTGTCGCTGA CCGACGACCA GAATTTCCAG GGCGGCTTCG GGCCGCTGTT GCCGGGCGTC
ACCACGGTCC CGTTCAACGA TCTCGAAGCG CTGGAGAAGG TGCTGTCGAC CCGCGAGATC
GCAGCCTTCA TCGTCGAGCC GATCCAGGGC AAGGGCGTCA ATATGCCCAG CGACGAGTTC
CTGCCGGGCG CGGCTGCGCT TTGCAAACGT TACGGCACGC TGTTCGTCGC CGACGAGATC
CAGACCGGGA TCGGCCGCAC CGGCCGCTTC CTTGCGGTCG AGCACTGGAA CGTCGAGCCC
GACATGGTGC TGTTGTCGAA GTCGTTGTCC GGCGGTCACG TGCCGGTCGG CGCGGTGCTG
ACGCGCAAGT CGATCTTCGA CAAGATCTTC AACCGGATGG ATCGCGCCGT GGTGCACGGC
TCGACCTTCG CCAAAAACGA TCTGGCGATG GCCGCCGGCA TCGCCACGCT CGAGGTGATG
AAGCACGAGA AGCTGGTGGA ATCCGCCGCC AAGCGCGGCG CCGAACTGCG GCTGGCGCTG
ACCCGCATGG TGCCGGGCTA TGAACTGCTC AAGGAAGTCC GCGGCAAAGG ATTGATGATC
GGCGTCGAGT TTGGCCCGCC GAAATCGCTG CGGCTGAAGG CGTCGTGGAC CATGCTGGAG
ACCGCCAACA AGGGGCTGTT CTGCCAGCTG ATCACCGTGC CGTTGTTCAA GGATCACAAG
ATCCTGACCC AGGTGTCGGG CCACGGCAGC CACACCATCA AGCTGTTGCC GTCGCTGACC
ATCACCGAAG ACGACTGCAA GTGGATCGAG ACCTCGTTCG ATTCGGTGAT CGCCGACAGC
CACAAGGTGC CGGGCGCGAT CTGGTCGCTC GGCAAGACGC TGGTCGACAA CGCGGTGCGC
AAATCGGCCT GA
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| Protein sequence | MAYPNLDVSQ MFADREAQRS SMHARHLNEQ LVRVLKTIGY DVGFQRGSGQ YLFDRDGARY
LDLLSGFGVF AIGRNHPVLR QALKSVLDAE MPNLVQLDVS TLAGILAERL LEYMPYLDKV
FFANSGAESV EAAIKFARVA TGRTGIVNCE HSYHGLTYGA LSLTDDQNFQ GGFGPLLPGV
TTVPFNDLEA LEKVLSTREI AAFIVEPIQG KGVNMPSDEF LPGAAALCKR YGTLFVADEI
QTGIGRTGRF LAVEHWNVEP DMVLLSKSLS GGHVPVGAVL TRKSIFDKIF NRMDRAVVHG
STFAKNDLAM AAGIATLEVM KHEKLVESAA KRGAELRLAL TRMVPGYELL KEVRGKGLMI
GVEFGPPKSL RLKASWTMLE TANKGLFCQL ITVPLFKDHK ILTQVSGHGS HTIKLLPSLT
ITEDDCKWIE TSFDSVIADS HKVPGAIWSL GKTLVDNAVR KSA
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