| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1714 |
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| Symbol | |
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| ID | 3972367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1859580 |
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| End bp | 1861949 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637924827 |
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| Product | RND superfamily transporter |
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| Protein accession | YP_531592 |
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| Protein GI | 90423222 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0904131 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGATA AGAACGCGAA CGACTCCGAC GTGGATGAAT TGAAACGACG GTCGGTCAGC
ATCGCCTTTG GCATCGAGCG GCTGGGACTG ATCGCGGTGC GGACCCCGAT CCTGTCCTGC
ATCATCCTCT TGGCGCTGGT GGTCGCCGCG ATCTTCGGCA TCGAACGGAT CAAGATCGAC
GATTCGCTGA GCCAGCTGTT CCGCTCCAAC TCCAAGGAAT ATCGGCAGTA CGAGGAGGTC
ACCAAGCGCT TTCCGTCGAC CGAATTCGAC GTCCTCGTGG TGGTCGAAGG CAAGACGCTG
CTGGCGCGCG ACAATCTGGA GAAGCTCCGC GATCTGGTCA CCGACCTGCA ATTGGTCGAC
GGCACCCGCG GGCTGATCTC GCTGTTTTCG GCGCGGCAGG CGCCGGCGCC GGGCAAGCTG
CCGGCGGCGC TGTTTCCTAA CGAACTGCCG GAAGGCGCCG ACTACGACAA ATTCATCGAG
ACGGTGAAAA GCAACGAGAT CATCCGTGGC AAGCTGTTGT CGGACGACGG CACGCTGGCG
TTGATCGTGC TGTCGCTCGA TCCGGACGTG GTCGGCAACA ATCGGCTCAG CACCACCGTC
GGCGAAATCC GCAAGATCAT GAACGACGAT CTCGCCGACA GCGGCTTGTC GAAGCAATTG
TCCGGCGTGC CGGTGATGCA GCTCGAAATC CGCAACGCGG TGGAGCGCGA CGGACTGATC
TACAACGTCG CCGGGATTCT GGCCGGCTGC CTGATCGCGA TCGTATTCTT CCGCAAGGTA
TCGTTCATGA TCGTGGCGGC GTTTCCGCCG CTGCTGGCGA TCCTGCTGGC GCTCGGCGCG
CTGGGCTGGG CCGGCTTCAG CCTGAACATG TTCCTCAACG TGATGACGCC GCTGATCATG
GTGATCAGCT TCTCGGATTC GATGCAGCTG ACCTTTGCCG CGCGCGATCG ATTGCTGGCG
GGGGAAGACC GTTTCACCGC GTTTCGCAAC GCCGTGCTGG TGGTCGGGCC GGCCTGCGTC
TTGACCCACG CCACCGCCGG CATCTCTTTC CTGGCGCTGC AATTCTCGGA TTCCGATCTG
ATCCGCGCGT TCGGCGAGGC CGGGCTTGCC GCCACCGTGA TCGCGCTGAT TGCGGTGCTG
TCGCTGGTGC CGGTGTTCGG CGTGCTGCTG GTGCGCAACG AGCAGGTGTT CGCCGCCAAA
TTCCAGGCCG CCGATGCCGG GGTCAACGCG CTGCGGCGGT TCTGCTACTG GATCGCGGTG
CGGATGGTCG GCCGCCCCGG GCTGTTCAGC CTGATCGCGG TAATCGTCGT CGGCGGTTTG
GCGGTGATCT ACGCCAATCT GGAGCCGCGC TATCGGCTCG CCGATCAGGT GCCGGACAAG
CAGCAGGCGG TGGAGGCATC CGGCCGGCTC GACGCCAAAT TGACCGGCGC CAATCCGATC
GACATTCTGG TGGAATTCCC CAAAGGCCAG ACGCTGTACT CGCCGGAGAC GCTGCAGACC
ATCGCCGACG TCCATGCCAT GGTGGAAAAG CAGGCCGGCG TCGGCAATGT CTGGTCGCTG
GAGACGCTGC GGCGCTGGCT CGCCGAAAAG GCCGGCAGCT CCGATGTCGC GACGTTGCAG
GAATACGTCA ACGTCATTCC GGAGCATCTG GTGCGCCGGT TCATCTCCGC CGACCAGACC
GCGGTGGTGG TGTCGGGGCG GGTGCCGGAT CTCGACTCCA GCGAAATCCT GCCGGTGGTG
GAGAAGCTCG ATAAGTCGCT CGACGCGGTG CGCGAGAAGC ATCCCGGCTA TGAGGTCGCG
GTGACCGGAC TGTCGGCGAT CGCGGCGCGC AACTCCGCCA ACATGATCCA GAAGCTCAAC
CACGGGCTGA CCATCGAATT CGTGCTGGTG GCGGTGTTCA TCGGCCTGGC ATTCCGTTCT
TTCGTGGTGA TGTTCGCCTG CATTCTGCCG GGCATCTTCC CGGTGGTGCT GTCCGGGACA
GTGTTGTGGG CGCTCGGCGA GGGGCTGCAA TTCGCCAGCG TGGTGGCGCT GACGGTGTCG
TTCGGATTGG GGCTTTCCGC CACCATCCAC TTCCTCAACC GGTTGCGGCT GGAAGACAAA
CCGGGCGTCG GATCGGCGCT GGCGGTGGAG CGGGCGACGG TGCTGGTCGG CCCGGCCTTG
ATCCTGACCA CGGTGGTCTT GGCCTGCGGC CTGGTGGTGA CGGTGTTTTC CGACCTGCCG
TCGCTGCGGC TGTTCGGCTG GCTCAGCGCC TTTGCGATGG TTGCGGCGCT GGTCGCGGAC
CTGTTCATCC TGCGGCCGAC CGCGATGTTC CTGATCACGC TGTCACAGCG ATTGCGCGGC
GCATTCAGCC GCCCGAAGGT GGCCAAGTAG
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| Protein sequence | MLDKNANDSD VDELKRRSVS IAFGIERLGL IAVRTPILSC IILLALVVAA IFGIERIKID
DSLSQLFRSN SKEYRQYEEV TKRFPSTEFD VLVVVEGKTL LARDNLEKLR DLVTDLQLVD
GTRGLISLFS ARQAPAPGKL PAALFPNELP EGADYDKFIE TVKSNEIIRG KLLSDDGTLA
LIVLSLDPDV VGNNRLSTTV GEIRKIMNDD LADSGLSKQL SGVPVMQLEI RNAVERDGLI
YNVAGILAGC LIAIVFFRKV SFMIVAAFPP LLAILLALGA LGWAGFSLNM FLNVMTPLIM
VISFSDSMQL TFAARDRLLA GEDRFTAFRN AVLVVGPACV LTHATAGISF LALQFSDSDL
IRAFGEAGLA ATVIALIAVL SLVPVFGVLL VRNEQVFAAK FQAADAGVNA LRRFCYWIAV
RMVGRPGLFS LIAVIVVGGL AVIYANLEPR YRLADQVPDK QQAVEASGRL DAKLTGANPI
DILVEFPKGQ TLYSPETLQT IADVHAMVEK QAGVGNVWSL ETLRRWLAEK AGSSDVATLQ
EYVNVIPEHL VRRFISADQT AVVVSGRVPD LDSSEILPVV EKLDKSLDAV REKHPGYEVA
VTGLSAIAAR NSANMIQKLN HGLTIEFVLV AVFIGLAFRS FVVMFACILP GIFPVVLSGT
VLWALGEGLQ FASVVALTVS FGLGLSATIH FLNRLRLEDK PGVGSALAVE RATVLVGPAL
ILTTVVLACG LVVTVFSDLP SLRLFGWLSA FAMVAALVAD LFILRPTAMF LITLSQRLRG
AFSRPKVAK
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