Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1707 |
Symbol | |
ID | 3972534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1849888 |
End bp | 1851087 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637924820 |
Product | HI0933-like protein |
Protein accession | YP_531585 |
Protein GI | 90423215 |
COG category | [R] General function prediction only |
COG ID | [COG2081] Predicted flavoproteins |
TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.105129 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGC CCGGCGGCGC TGCAACGACC TATGACGTGA TCATTCTCGG CGCCGGCGCC GCGGGGCTGA TGTGCGCCGG CGTCGCGGCC AAGCGCGGCC GCTCGGTGCT GCTGATCGAG CAAGGCCAGC ATCCCGGCGA AAAGATCCGG ATCTCCGGCG GCGGCCGCTG CAACTTCACC AACCTCAACA CCACGCCGGC GAATTTCCAA TCGCAGAATC CGCGGTTCTG CCGCTCCGCG CTGAGTAGCT ACACTCAGCA CGACTTCATC GCGCTGGTCG AGAAACACGG CATCGCCTAT CACGAAAAAA CCCGCGGGCA ATTGTTCTGC GACGGCTCGG CCAAGCAGAT CATCGACATG CTGCTGTCGG AATGCCGCGG CGGCGGGGTG CAGATCCGCT CCGGGATTCG CAGCCCGGCG ATCGAGCGGA CCGCGGACGG CTTCACGCTG ACTACGGATC ACGGCCGGCT CGAGGGCCGC GCGTTGGTGG TGGCGACCGG CGGGCCGTCG ATCCCGAAGA TCGGCGCCAG CGGCTTCGGC TACAAGGTGG CCGAACAATT CGGGCTGACC ATCGTCCCTC CGCGCGCCGC CTTGGTGCCG TTGACCTTTG CGCCGGCTGA GCTTGCGCAA TTTGCTGAAC TCTCCGGCAT CGCGGTCGAC GCGGTGGTCG CCTGCGGCAA GGCGAAATTC GACGAGGCGC TGCTGTTCAC CCATCGCGGC CTGAGCGGGC CGGCGATCCT GCAGATCTCC TCCTATTGGC GCGACGGCGA CGACATCGTC ATCGACATGG CGCCGGGCAC CGACGTGTTG GCTGCGCTGA AACATGCGCG CCGCGAGCAT CCGCGGCAAG AACTGGCGGC GGCGTTCGGC GCCCTGTTGC CGAAGCGGCT GGCGCAGGCC ATTGCCGAGC GGCTCGGCAA GCCGGCGCGG ATCGCCGACT GTTCCGACAA GGTGCTGGCG GCCGCCGCCG CCGCGGTGCA GCAATGGCGG CTCAAGCCCA ACGGCACCGA GGGCTATCGC ACCGCCGAGG TGACGCTGGG CGGGGTGGAT ACCAGCGAGT TGTCGTCGAA AACCTTCGAG GCGCGCAGCG TTCCGGGGCT GTATTTCATC GGCGAGGTGG TCGACGTCAC CGGCCAACTC GGCGGCTTCA ATTTCCAATG GGCGTGGTCG TCAGGCGTCG CGGCCGGCCG GGCCGTGTAG
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Protein sequence | MSKPGGAATT YDVIILGAGA AGLMCAGVAA KRGRSVLLIE QGQHPGEKIR ISGGGRCNFT NLNTTPANFQ SQNPRFCRSA LSSYTQHDFI ALVEKHGIAY HEKTRGQLFC DGSAKQIIDM LLSECRGGGV QIRSGIRSPA IERTADGFTL TTDHGRLEGR ALVVATGGPS IPKIGASGFG YKVAEQFGLT IVPPRAALVP LTFAPAELAQ FAELSGIAVD AVVACGKAKF DEALLFTHRG LSGPAILQIS SYWRDGDDIV IDMAPGTDVL AALKHARREH PRQELAAAFG ALLPKRLAQA IAERLGKPAR IADCSDKVLA AAAAAVQQWR LKPNGTEGYR TAEVTLGGVD TSELSSKTFE ARSVPGLYFI GEVVDVTGQL GGFNFQWAWS SGVAAGRAV
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