| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1701 |
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| Symbol | |
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| ID | 3972528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1840666 |
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| End bp | 1843938 |
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| Gene Length | 3273 bp |
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| Protein Length | 1090 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637924814 |
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| Product | transglutaminase-like |
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| Protein accession | YP_531579 |
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| Protein GI | 90423209 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases
[COG4196] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.126756 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.484971 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCGATCT TCGTCGCCCT ACACCACGTC ACGCATTACA AATACGACCG CCCCATCGAT
CTTGGCCCGC AAACCGTGCG GCTGCGGCCG GCGCCGCACA CCAGGACCCC GATCCTGAGC
TATTCGCTCA AGGTCACGCC TTCGAATCAC TTCGTCAATT GGCAGCAAGA CCCGCAGGGC
AATTGGCTGG CGCGCTTCGT GTTTCCGGAG AAGGCCAGCG AACTGAAGAT CGAGGTGGAT
TTCTCCGCCG AGATGACGGT GATCAATCCG TTCGACTTCT TCGTCGAGCC TTATGCCGAA
AGCTTCCCGT TCGCTTATAC CAATGATTTG CAGACCGAGC TTGCGCCCTA TCTCGCCACC
GAGCCGAGCG GGCCGCTGTT CGAGGCCTAT CTCGCCGAGA TCGCCCGCGA GGCGCCGAGC
ACGGTCAACT TCCTGGTCGA TCTCAACGCC CGGCTGCGCG ACCGCATCAA TTACATCATC
CGCATGGAGC CGGGGATCCA GACCCCGGAG CATACGCTGC AGACCGGCGC CGGCTCGTGC
CGTGATTCGG CCTGGCTGTT GATCCAGACG CTGCGCCGGC TCGGCCTCGC GGCGCGCTTC
GTCTCCGGTT ATCTCATTCA GTTGCGGCCC GACATCGCCC CGATCGATGG CAAGGTCGAG
GTCGAGAACG ATTTCACCGA TCTGCACGCC TGGGCCGAGG TCTATATCCC CGGCGCCGGC
TGGATCGGCT TCGACGCCAC CTCGGGGATG CTGGCCGGCG AGGGCCATAT CCCGGTCGCC
GCGACGCCGC ATTATCGCTC GGCGGCGCCG ATCTCCGGCA TGGCCGGCTT CGCCAATGTC
GATTTCAACT TCGAGATGAG CGTGAAGCGG ATCCGCGAGG TGCCGCGGAT CACCAAGCCG
TTCTCCGACG CAGCCTGGGC GCGGCTCGAT CAGGTCGGCG AACAGGTCGA CGCCGATCTG
AAAGCCGACG ACGTCAGGTT GACCATGGGC GGTGAACCGA CCTTCGTCTC GATCGACGAT
CTGGAATCGC CGGAATGGAA TATCGCCGCG GTCGGCCCGA CCAAGCGGGT GCTCGGCGAC
GATCTGCTGC GCCGGCTACG CGAGCGCTTT GCGCCGGGCG GGCTGCTGCA TTTCGGCCAG
GGCAAATGGT ATCCCGGCGA AAGCCTGCCG CGCTGGGCGT TCGGGCTGTA TTGGCGCAAG
GACGGCGTGC CGGTCTGGAA AAACCCGCAG CTGATCGCGC CGGTCGAGGG CAAGCGTCCG
GTCAAGATCG AGGAAGCGCA GCGCTTCGCC GTCGACACCG CCAAGCGGCT CGGCGTTCAT
TCCGACTACA TCCTGCCGGC GTTCGAAGAC CCGGCGCACT GGCTGCAGAA AGAAGCGGGG
CTGCCGCCGA ATGTCGATCC CAGCGATTCC AAGCTCGCCG ATCCGGAAGA GCGCGCGCGG
ATGGCGCGGG TGTTCGATCA GGGCCTCAAC GTGCCGAAGG GCTACGTGCT GCCGATCCAG
CGTTGGAACG CCGAGGCCGA TCGCTGGCGC AGCGAGCGCT GGAAATTCCG CCGCGGCAAT
CTGTTTCTGA CGCCGGGCGA TTCGCCGCTC GGGCTGCGGC TGCCGATCTC GTCATTGCCG
CATATTCCCG AGGACGAATT CCCCTACACC GTCGAGCAGG ATCCGCTGGA GCCGCGCGAT
CCGTTGTCGG AGGCTGGCGA AGCATCGGCC GAGGCCGCGG CGAAGTCGTC CGCGGAAAAG
CCGAAGAAGA AGCAAGTCCC GGTGCGCACC GCGATGTCGA TCGAGGTGCG CGACGGCGTG
CTGTGCGCGT TCATGCCGCC GGTGGAGAAG CTGGAAGATT ATCTCGAACT GATCGCGGCG
GTGGAGGCCA CCGCCGAAGA GATGCAGATG CAGGTCCACG TCGAGGGCTA TCCGCCGCCG
TTCGATCCGC GCATCGAAGT GATCAAGGTG ACGCCGGATC CGGGCGTCAT CGAGGTCAAT
ATTCATCCAG CGGCAAACTG GCGGCAGGCG GTCGAGACCA CTTTTGCGCT TTACGAGGAG
GCGGCCAAGG TCCGGCTCGG CGCCAACCGC TTCCTGGTCG ACGGCCGCCA CACCGGCACC
GGCGGCGGCA ACCACGTCGT GGTCGGCGGC GCGACGCCTT CCGACTCGCC GTTCCTGCGC
CGGCCCGATC TGTTGAAGAG TTTTGTTTTG TATTGGCAGC GCCACCCGTC GCTGTCCTAC
CTATTCTCCG GGATGTTCAT CGGCCCGACC AGCCAGGCGC CGCGGATCGA CGAGGCGCGG
CACGACGGGC TCTACGAACT CGAGATCGCG GTCGCGCATG TGCCGCCGCC CGGCGTCACC
GGACCGCTGT GGCTGGTCGA CCGGCTGTTC CGCAACATCC TGGTCGATAT CACCGGCAAC
ACCCACCGCG CCGAGATCTG CATCGACAAG CTGTATTCGC CGGACAGCTC GACCGGCCGG
CTCGGCCTGG TGGAATTCCG CGCGCTCGAA ATGCCGCCGG ACCCGCGGAT GAGCCTCGCC
CAGCAATTGC TGATCCGGGC GCTGGTCGCC AAACTGTGGC GCGAGCCGCT GGATGGCAAG
TTCGTGCGCT GGGGCACCAC GCTGCATGAT CGTTTCATGC TGCCTTACTA CTTGTGGGAG
GACTTCAAGG GCGTGCTCGC CGAGTTGCGA GAGTCCGGCT ACGAGTTCTC GCCGGAATGG
TTCGAAGCGC AGCTGGAATT CCGCTTTCCG GTGTTCGGCA GCGTCAGCCA TGGCGGCGTC
TCGCTGGAAG TGCGCCAGGC TTTGGAGCCC TGGCACGTGA TGGGCGAGGA AGGCTCGGCC
GGCGGCACCG TGCGCTATGT CGATTCCTCG GTGGAGCGGC TGCAGCTGAA GACCGAAGGT
TTCGTCGAGG GCCGCCATGT GGTGACCTGC AACGGACGGC GGCTGCCGAT GACTTCGACC
GGGCGCTCCG GTGAGGCGGT AGCGGCGGTG CGGTTCAAGG CCTGGCAGCC GGCCTCGGGG
CTGCATCCGA CCATTCCGGT GCATACCCCG CTGGTGTTCG ACATCGTCGA CACTTGGAAC
GGCCGCTCGC TCGGCGGCTG CGTCTATCAC GTCGCCCATC CGGGCGGACG CTCCTACGAG
ACCAAGCCGG TCAACTCGTA TGAAGCCGAG GCGCGGCGGC TGGCGCGGTT TCAGGACCAC
GGCCACACGC CCGGCAAGGT CGATCCGCCG CGCGAAGAAC GCAGCCTCGA ATTTCCGCTG
ACCCTCGATC TGCGGACGCC GCTGCCGCAT TAG
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| Protein sequence | MSIFVALHHV THYKYDRPID LGPQTVRLRP APHTRTPILS YSLKVTPSNH FVNWQQDPQG
NWLARFVFPE KASELKIEVD FSAEMTVINP FDFFVEPYAE SFPFAYTNDL QTELAPYLAT
EPSGPLFEAY LAEIAREAPS TVNFLVDLNA RLRDRINYII RMEPGIQTPE HTLQTGAGSC
RDSAWLLIQT LRRLGLAARF VSGYLIQLRP DIAPIDGKVE VENDFTDLHA WAEVYIPGAG
WIGFDATSGM LAGEGHIPVA ATPHYRSAAP ISGMAGFANV DFNFEMSVKR IREVPRITKP
FSDAAWARLD QVGEQVDADL KADDVRLTMG GEPTFVSIDD LESPEWNIAA VGPTKRVLGD
DLLRRLRERF APGGLLHFGQ GKWYPGESLP RWAFGLYWRK DGVPVWKNPQ LIAPVEGKRP
VKIEEAQRFA VDTAKRLGVH SDYILPAFED PAHWLQKEAG LPPNVDPSDS KLADPEERAR
MARVFDQGLN VPKGYVLPIQ RWNAEADRWR SERWKFRRGN LFLTPGDSPL GLRLPISSLP
HIPEDEFPYT VEQDPLEPRD PLSEAGEASA EAAAKSSAEK PKKKQVPVRT AMSIEVRDGV
LCAFMPPVEK LEDYLELIAA VEATAEEMQM QVHVEGYPPP FDPRIEVIKV TPDPGVIEVN
IHPAANWRQA VETTFALYEE AAKVRLGANR FLVDGRHTGT GGGNHVVVGG ATPSDSPFLR
RPDLLKSFVL YWQRHPSLSY LFSGMFIGPT SQAPRIDEAR HDGLYELEIA VAHVPPPGVT
GPLWLVDRLF RNILVDITGN THRAEICIDK LYSPDSSTGR LGLVEFRALE MPPDPRMSLA
QQLLIRALVA KLWREPLDGK FVRWGTTLHD RFMLPYYLWE DFKGVLAELR ESGYEFSPEW
FEAQLEFRFP VFGSVSHGGV SLEVRQALEP WHVMGEEGSA GGTVRYVDSS VERLQLKTEG
FVEGRHVVTC NGRRLPMTST GRSGEAVAAV RFKAWQPASG LHPTIPVHTP LVFDIVDTWN
GRSLGGCVYH VAHPGGRSYE TKPVNSYEAE ARRLARFQDH GHTPGKVDPP REERSLEFPL
TLDLRTPLPH
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