| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1693 |
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| Symbol | |
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| ID | 3972520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1831357 |
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| End bp | 1832982 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637924806 |
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| Product | hypothetical protein |
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| Protein accession | YP_531571 |
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| Protein GI | 90423201 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCAA TGACCGGCGG CGAAGCGATC GTCGATGGCC TGCGCGCGCA CGGCGTCGAC
ACCGTGTTCG GGCTGCCCGG CGCGCAGATC TACGGGCTGT TCGACGGCTT CGCCAAAGCG
AAGTTGAAGG TCATCGGCGC GCGGCACGAG CAGGCCTGCG GCTACATGGC ATTCGGCTAC
GCCCGCGCCA CCGGCCGCCC CGGGGTGTTC AGCGTGGTGC CGGGCCCGGG CGTGCTCAAT
GCCTCCGCGG CGATGCTCAC CGCGTTCGGC TGCAACGAGC CGGTGCTGTG CCTCACCGGC
CAGGTGCCGA GCGCGTTCCT CGGCCGCGGC CGCGGCCATC TGCACGAGAT GCCGGACCAG
CTGGCGACCT TGCGCAGTTT CCTGAAATGG GCGGAGCGGA TCGAATATCC CGGCGCCGCG
CCGACTTTGG TGTCGCGCGC GTTCCAGGAG ATGCTGTCCG GCCGGCGCGG CCCCGCGGCG
CTGGAAATGC CGTGGGACGT CTTCATGCAG CGCGCCGCGG TCGGGGCTTC GACGGCTTTG
CCGCGCTTTC CGGCACCATT GCCCGATCCG GATCGGGTCG CCGCCGCGGC GGCGCTGATC
GCCGCCAGCA AGACGCCGAT GATCTTCGTC GGCAACGGCG CCTTCGAGGC CGCCGATGAG
ATCCTGGAAT TGGCCGAAGC GATCGACGCG CCGGTGGTGG CGTTCCGCTC CGGCCGCGGC
ATCGTCAGCA ACGCTCACGA GCTCGGTCTG TCGTTTGCCG CGGCCTACAA TCTGTGGCCG
TCGACCGACC TGATCATCGG CATCGGCACC CGGCTGGAAT TGGCGACGAT GTATCGCTGG
CCGTACCGGC CCGCCGGGCA GACATCGATC CGCATCGACA TCGATGCGTC GGAGATGCGC
CGCTTCACCC CGGACGCGGC GATCGTCGCC GACGCGCAAG CCGGCACCCG CGATCTGTTG
GCCGCGGTGC GCAAGGGCGG CTACGCCAAG TCGAGCACGC GCCGCGGAGA GATCCGTGAG
GCCTCGGCGC TCGCAGCACA GCAGATCGAA ATCGTGCAGC CGCAGATGGC TTACTTGAAG
ATCTTGCGCG AGGTGCTGCC GGCCGAGGCC ATCGTCACCG ACGAACTGTG CCAGGTCGGC
TTCGCCTCCT GGTTCGGCTT TCCGGTGTAC CAGCCGCGCA CCTATCTCAC CTCGGGCTAT
CAGGGCACGC TCGGCTCCGG TTTTCCCACC GCGCTCGGCG CCAAGGTGGC CTATCCGGAC
CGGCCGGTGG TGGCGATCAC CGGCGATGGC GGCTTCATGT TCGCGGTGCA GGAATTGGCC
ACCGCCGTGC AGTACAACAT CGGCGTGGTG ACGCTGGTGT TCAACAACTC CGCCTACGGC
AACGTGCGGC GCGATCAGCG CAGCATGTTC GATGGCCGCG TGGTGGCGTC CGATCTGCAC
AACCCGGATT TCGTCAAGCT CGCGGAGTCG TTCGGCGTGG GCGCGTGCCG CGTGCGGTCG
CCAGGCGAAT TTCGTGCGGC GCTCGAAACG GCGCTGGGCG ACGGCGGGCC GTATCTGATC
GCGATCGAAA TCGAAAAAGA CGGCGAAGCA AGCCCCTGGC CGTTCATTCA TCCGCCGAAG
CCGTAA
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| Protein sequence | MTAMTGGEAI VDGLRAHGVD TVFGLPGAQI YGLFDGFAKA KLKVIGARHE QACGYMAFGY
ARATGRPGVF SVVPGPGVLN ASAAMLTAFG CNEPVLCLTG QVPSAFLGRG RGHLHEMPDQ
LATLRSFLKW AERIEYPGAA PTLVSRAFQE MLSGRRGPAA LEMPWDVFMQ RAAVGASTAL
PRFPAPLPDP DRVAAAAALI AASKTPMIFV GNGAFEAADE ILELAEAIDA PVVAFRSGRG
IVSNAHELGL SFAAAYNLWP STDLIIGIGT RLELATMYRW PYRPAGQTSI RIDIDASEMR
RFTPDAAIVA DAQAGTRDLL AAVRKGGYAK SSTRRGEIRE ASALAAQQIE IVQPQMAYLK
ILREVLPAEA IVTDELCQVG FASWFGFPVY QPRTYLTSGY QGTLGSGFPT ALGAKVAYPD
RPVVAITGDG GFMFAVQELA TAVQYNIGVV TLVFNNSAYG NVRRDQRSMF DGRVVASDLH
NPDFVKLAES FGVGACRVRS PGEFRAALET ALGDGGPYLI AIEIEKDGEA SPWPFIHPPK
P
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