Gene RPC_1687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1687 
Symbol 
ID3972747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1826833 
End bp1827246 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content64% 
IMG OID637924800 
Producthypothetical protein 
Protein accessionYP_531565 
Protein GI90423195 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0475632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAGC CATCGCGCGC GCGACCGAAA CCAACTCCGG AAACCCAACA TTTCTGGGAC 
GGCACAAAGG CCGGCGAATT ACGATTGCAG CGTTGCGATG CCTGCGCTCA TGTGTATTTC
CCGCCGCGGC CGTTCTGCCC CAAATGCGCC AGCCGCAACG TCACCGTGTT CCGGGCCTCT
GGCCACGCCA CGCTGTACAG CTACGTCATC AATCATCGCC CCGCCGCGCC CGGCTTCACC
GCGCCTTACG CCATCGCCGT GGTCGAACTC GCCGAAGGCC CGCGGATGAT GTGCAACATT
CTCGATTGCC CGCAGACGCC GGAAGCGCTC GAACTCGACA TGAAACTCGA AGTCGCGTTC
GAGAGGCTCG ACGACGCCGT CACGCTGCCC CAGTTCCGTC CGGCGAAGGG ATAG
 
Protein sequence
MAEPSRARPK PTPETQHFWD GTKAGELRLQ RCDACAHVYF PPRPFCPKCA SRNVTVFRAS 
GHATLYSYVI NHRPAAPGFT APYAIAVVEL AEGPRMMCNI LDCPQTPEAL ELDMKLEVAF
ERLDDAVTLP QFRPAKG