| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1681 |
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| Symbol | |
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| ID | 3972741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1816067 |
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| End bp | 1818847 |
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| Gene Length | 2781 bp |
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| Protein Length | 926 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637924795 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_531560 |
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| Protein GI | 90423190 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.270935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCAGG GATTGAGCCT TTCGACCCGC CTGACGATCG CCATCGTGGC GCTGGTCGTC
GCCACCGCCG GCACGGTGGG CTATCTGAGC TATCGCAACA TCGCTGCCAT CGCGGTGCCG
CGCGCCCTGG TGCGGCTCGA CGCCCATGCC CAATCGGTCG CCGTGGATCT CGCCAACATC
GTCAAGAACG CTCGCGCCGA TGTGAAAGGG TTTCGCGACG TGATCGGACT CGAGGAGATC
ATCGCCCTCA GTCGCGATCC GTCGCTCGCG AGATCGGGTG GCTTGACACC GGCGCAATGG
CGGGCCCGGA TCGCACGGCG CTTCGCCGCC GAACTGGAGG CCAAACAGCA CTATGCGCAA
TTCCGGATCG TTGGAATCGC CGATGGCGGC CGCGAGCTGA TCCGGGTCGA CCGTCGCTCG
GGTGACGGCA AGGTGCGCAT CGTCGCCGAC GCCGACTTGC AGCAGAAAGC CGACCGCGGT
TACTTCAAGC AGGCCGCCGC AGCGCCCGAC CGCAGCATCA TCGTGTCGCC GATCGAACTC
AATCAGGAGA ACGGCGCGAT TGAACTCCCG CCGCAGCCGG TGGTGCGCAT CTCCTCGCCG
ATCTTCGCAC CGGACGGCCA ATTGTTCGGA CTGCTGATCG TCAATATCGA TCTGCGGCCG
GCCTTCGCGA CGCTCAAAGC GCGCGCCGCT CCCGACACCA CCATCTATGT GGTGAATGAG
CGCGGCGACT ACCTGGCGCA TCCGGATTCG GAGCGCGAAT TCGGCTTCGA GTTCGGCACG
CCGTTCCGCG TCCAGGACGA TTTTCCGGCG GCTGCGCGGG CCCTGGCCGA GGGGGATCCG
CACCCCGGAC TGATCGAACA CCGCGGCGGC AAACGCTACG GCCTGGCGAT GGCTTCGCTG
CGGCTCGGCG ATGGCCCGCC GGTGTCGGTG GTCGAGGTGA TCCCCGAGGA CAAGATCATC
GCCCTCGCGC TGAAGGCGCT GCGCGACTCC AGCCTGCTCG GCGGCACCAT CGCGGTGCTC
GGCGCGATGC TGCTGGGGTT CATTCTCGCC CGCACCCTGA CCCGGCAATT GACGCAGATG
ACCGCGGCGG TCTCAGGCTT TGCCGATGGC AAACCGCTGG TGGTGCCGCT CAATGCCGGC
GGCGAGATCG GCGTTCTGGC GCGGGCATTC CAGAACATGG CGCGAGAGGT CGACGAGAAG
AACGCCGCGA TCCGGCGCGA AAAGGACATC TTCGAGGGCA TCATGTCGGC GATGGCCGAG
GCCGTACTGC TGATCGATGC CGACGGCATC ATCGTCTATG CCAATCGCGC CAACCAGGAA
CTGCTCGGGC CGATCGCGAC GGACGGCACC ACATGGCGCG AACTCTACGA CATCTATCTA
CCCGATGGCA CCACGCTGCT GCCGAGGCAG CAATGGCCCT CGGCGCGATG CCTGCGCGGC
GAACAGGTCG ACGGCTTCGA ACTGGTGTAC CGGCGTCGCG ACAGCGGCAA GACCGTGCAT
GTGATGGGCA GTGCGCATCC GATCCGCGGC GCGGAAGGTG CGCGCGCCGG CGTGGTCGTG
GTCTATCGCG ACGTCACCGC CACCAAGGAG ATCGAGCGCC AACTGCACCA GTCGCAGAAG
CTCGACGCCA TCGGCCAGCT GACCGGCGGC GTCGCCCACG ACTTCAACAA CACGCTGACG
GTGATCACCG GCACCGCCGA AATCCTGTTC GAGAGCCTCG CCGACCGGCC CAACCTGCAG
CAGATCGCCA AGATGATCGA CGACGCCGCC GGCCGCGGCG CCGAGCTTAC CAAGCATCTG
CTGGCCTTTG CCCGCCGGCA GCCGCTGCAG CCGCGCAATG TCGACGTCAA CACCTTGGTG
CTCAACACCG CGCAATTGCT GCGGCCGACG CTGGGCGAGC AGATCGAGAT CGAATCGATG
CTCGGCAACG ACGCCGAACC GGCGCATATC GATCCCTCGC AGCTGTCGAC CGCGCTGCTC
AACCTTGCGG TCAACGCCCG CGACGCGATG CCGAACGGCG GCAAGCTGAC GCTGGAGACC
GGCAACGTGG TGCTCGACGA GACTTACGCG CACGCCAACC CCGAGGTGAC GCCCGGGCCC
TATGTGATGA TCGCGGTCAG CGACAGCGGC ACCGGCATCT CGGCGGCCAT CCTCGACAAG
GTGTTCGAGC CGTTCTTCAC CACCAAGGAC GTCGGCAAGG GCACCGGGCT CGGGCTCAGC
ATGGTGTACG GTTTCGTCAA GCAGTCCAAC GGACATATCA AGATCTACAG CGAGGAAGGC
TACGGCACCA CGATCAAGCT GTATCTGCCG CGCGCCAGCG CCGACGCCGA AGAGCTCGCG
CCCACCGCGC CGATCAAAGG CGGCAGTGAA ACCGTACTGG TGGTGGAAGA CGACGCCATG
GTGCGCAATT TCGTCGTCAC CCAGCTGCGC AGCCTCGGCT ACAAGACGCT GACGGCGGCG
AACGGCGCCG AAACGCTGGC GCAGATCGAC GCCGGCGCGA CGTTCGACCT GCTGTTCACC
GACGTCATCA TGCCCGGCCT CAACGGCCGG CAACTGGCCG AGGCCGTCAA GCAGCGGCGG
CCCGCCACCA AGGTGCTCTA CACTTCGGGC TACACCGAGA ACGCCATCGT GCATCACGGC
CGGCTGGATC CCGGGGTGTT GCTGCTGCCG AAGCCGTACC GCAAATCCGA ACTGGCGCGA
CTGATCCGCG CGGCGCTGAA TTCCGGCATC GCTCCTGCCG ACGACATCCA CATCGGACTA
TCAGGGCGCG TGTCGTCCTG A
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| Protein sequence | MSQGLSLSTR LTIAIVALVV ATAGTVGYLS YRNIAAIAVP RALVRLDAHA QSVAVDLANI
VKNARADVKG FRDVIGLEEI IALSRDPSLA RSGGLTPAQW RARIARRFAA ELEAKQHYAQ
FRIVGIADGG RELIRVDRRS GDGKVRIVAD ADLQQKADRG YFKQAAAAPD RSIIVSPIEL
NQENGAIELP PQPVVRISSP IFAPDGQLFG LLIVNIDLRP AFATLKARAA PDTTIYVVNE
RGDYLAHPDS EREFGFEFGT PFRVQDDFPA AARALAEGDP HPGLIEHRGG KRYGLAMASL
RLGDGPPVSV VEVIPEDKII ALALKALRDS SLLGGTIAVL GAMLLGFILA RTLTRQLTQM
TAAVSGFADG KPLVVPLNAG GEIGVLARAF QNMAREVDEK NAAIRREKDI FEGIMSAMAE
AVLLIDADGI IVYANRANQE LLGPIATDGT TWRELYDIYL PDGTTLLPRQ QWPSARCLRG
EQVDGFELVY RRRDSGKTVH VMGSAHPIRG AEGARAGVVV VYRDVTATKE IERQLHQSQK
LDAIGQLTGG VAHDFNNTLT VITGTAEILF ESLADRPNLQ QIAKMIDDAA GRGAELTKHL
LAFARRQPLQ PRNVDVNTLV LNTAQLLRPT LGEQIEIESM LGNDAEPAHI DPSQLSTALL
NLAVNARDAM PNGGKLTLET GNVVLDETYA HANPEVTPGP YVMIAVSDSG TGISAAILDK
VFEPFFTTKD VGKGTGLGLS MVYGFVKQSN GHIKIYSEEG YGTTIKLYLP RASADAEELA
PTAPIKGGSE TVLVVEDDAM VRNFVVTQLR SLGYKTLTAA NGAETLAQID AGATFDLLFT
DVIMPGLNGR QLAEAVKQRR PATKVLYTSG YTENAIVHHG RLDPGVLLLP KPYRKSELAR
LIRAALNSGI APADDIHIGL SGRVSS
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