Gene RPC_1667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1667 
Symbol 
ID3972590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1799698 
End bp1800663 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content67% 
IMG OID637924782 
ProductLysR family transcriptional regulator 
Protein accessionYP_531547 
Protein GI90423177 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACT TCAAAGCGAT CGAGACCTTC TTATGGGTGG TGACGCTCGG CAGCTTCCGC 
GGCGCCGCGC AAAAACTCAA CACCACGCAG CCGGCGATTT CGCAACGCAT CGCCCAGTTG
GAACGCGAAC TCGGCGTCAA GCTGCTGCAG CGCGACCATC GCAGCGCGTC GCCGACGCCG
AGCGGTCGGC AGATGATGGT CTATGCCGAA AAGCTGATCG GGCTGCGCTC CGAAATGCTG
GCGGTGGTCG GCGATCGCTC GGCGATGCGC GGCGTGCTGC GGCTCGGCGT CGCCGAGACC
ATCGTGCACA CCTGGCTGCC GCAGCTGATC AAGAGCGTCA ACCGCGCCTA TCCCAACCTG
TCGCTGGAAA TCGAAGTCGA GATCACCCCG GATCTGCGCG CCCGGTTGAT GGCGCAGGAA
ATCGACCTGG CCTTCCTGCT CGGGCCGCTG CCGGACCCCA CGGTGCGCAA CCGGCTGTTG
TGCGAGTATC CGGTCGGCTT CCTGGCCAGC CCATCGCTCG GGCTCGGCGA CGCAACGCTG
ACGCTGCGCG ATCTCGCCAA ACATCCGATC ATCACCTTCC CGCGCAAGTC GCAGCCTTAC
GAGACCATCC GCTCGCTGTT CAACCGGCCG GAGCTGCCGC CGATCCGGCT GCACGCCAGC
GCGTCGCTGG CCACCGTGAT TCACATGGCG GTGGAGGGAT TGGGCATCGC GGTGATTCCC
ACCGACATCG TCGAAGCCGA ACTCGGCGAC GGCCGGCTGC AACTGTTGAA GACCGACCTG
CATATTCCGC CGCTGACGTT TTCGGCGAGC TGGCTGGATT CGGCCGACAC CACCGCGGTG
GAACGCGTCG CCCATCTCGC CACCGAGATC GCCGAGGTCG GCGGCTTTGC CGGCCAGGCG
CCCGCCAAGC CGCAGCCGCA GTCGCAGCCC GCGGCCAAGC AGCCGTCGCG CGAACCGATC
GGTTGA
 
Protein sequence
MADFKAIETF LWVVTLGSFR GAAQKLNTTQ PAISQRIAQL ERELGVKLLQ RDHRSASPTP 
SGRQMMVYAE KLIGLRSEML AVVGDRSAMR GVLRLGVAET IVHTWLPQLI KSVNRAYPNL
SLEIEVEITP DLRARLMAQE IDLAFLLGPL PDPTVRNRLL CEYPVGFLAS PSLGLGDATL
TLRDLAKHPI ITFPRKSQPY ETIRSLFNRP ELPPIRLHAS ASLATVIHMA VEGLGIAVIP
TDIVEAELGD GRLQLLKTDL HIPPLTFSAS WLDSADTTAV ERVAHLATEI AEVGGFAGQA
PAKPQPQSQP AAKQPSREPI G