Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1667 |
Symbol | |
ID | 3972590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1799698 |
End bp | 1800663 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637924782 |
Product | LysR family transcriptional regulator |
Protein accession | YP_531547 |
Protein GI | 90423177 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACT TCAAAGCGAT CGAGACCTTC TTATGGGTGG TGACGCTCGG CAGCTTCCGC GGCGCCGCGC AAAAACTCAA CACCACGCAG CCGGCGATTT CGCAACGCAT CGCCCAGTTG GAACGCGAAC TCGGCGTCAA GCTGCTGCAG CGCGACCATC GCAGCGCGTC GCCGACGCCG AGCGGTCGGC AGATGATGGT CTATGCCGAA AAGCTGATCG GGCTGCGCTC CGAAATGCTG GCGGTGGTCG GCGATCGCTC GGCGATGCGC GGCGTGCTGC GGCTCGGCGT CGCCGAGACC ATCGTGCACA CCTGGCTGCC GCAGCTGATC AAGAGCGTCA ACCGCGCCTA TCCCAACCTG TCGCTGGAAA TCGAAGTCGA GATCACCCCG GATCTGCGCG CCCGGTTGAT GGCGCAGGAA ATCGACCTGG CCTTCCTGCT CGGGCCGCTG CCGGACCCCA CGGTGCGCAA CCGGCTGTTG TGCGAGTATC CGGTCGGCTT CCTGGCCAGC CCATCGCTCG GGCTCGGCGA CGCAACGCTG ACGCTGCGCG ATCTCGCCAA ACATCCGATC ATCACCTTCC CGCGCAAGTC GCAGCCTTAC GAGACCATCC GCTCGCTGTT CAACCGGCCG GAGCTGCCGC CGATCCGGCT GCACGCCAGC GCGTCGCTGG CCACCGTGAT TCACATGGCG GTGGAGGGAT TGGGCATCGC GGTGATTCCC ACCGACATCG TCGAAGCCGA ACTCGGCGAC GGCCGGCTGC AACTGTTGAA GACCGACCTG CATATTCCGC CGCTGACGTT TTCGGCGAGC TGGCTGGATT CGGCCGACAC CACCGCGGTG GAACGCGTCG CCCATCTCGC CACCGAGATC GCCGAGGTCG GCGGCTTTGC CGGCCAGGCG CCCGCCAAGC CGCAGCCGCA GTCGCAGCCC GCGGCCAAGC AGCCGTCGCG CGAACCGATC GGTTGA
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Protein sequence | MADFKAIETF LWVVTLGSFR GAAQKLNTTQ PAISQRIAQL ERELGVKLLQ RDHRSASPTP SGRQMMVYAE KLIGLRSEML AVVGDRSAMR GVLRLGVAET IVHTWLPQLI KSVNRAYPNL SLEIEVEITP DLRARLMAQE IDLAFLLGPL PDPTVRNRLL CEYPVGFLAS PSLGLGDATL TLRDLAKHPI ITFPRKSQPY ETIRSLFNRP ELPPIRLHAS ASLATVIHMA VEGLGIAVIP TDIVEAELGD GRLQLLKTDL HIPPLTFSAS WLDSADTTAV ERVAHLATEI AEVGGFAGQA PAKPQPQSQP AAKQPSREPI G
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