Gene RPC_1654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1654 
Symbol 
ID3972577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1788554 
End bp1789342 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content70% 
IMG OID637924770 
Producthypothetical protein 
Protein accessionYP_531535 
Protein GI90423165 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.876458 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGATC CCGCGCCGTC GACGCCGCCG CTTCGTCCGC CCAGCCTCGG GCTGTTGCTG 
GCCGAGGCCC GCAGCCTGCT CGAGCTGAAC GCCAGCCTGC TGCTGGCGCC GCTGTTGATG
CAGGCGCCGA AGGGTGATGG CCATCCGGTG CTGGTGCTGC CCGGACTGTT GGCGAGCGAT
CTGTCCACAG CGCTGCTGCG CCGCTTCTTG AAACATCTCG GCTATCACAG CTTCGCCTGG
GGGCTCGGCC GCAACATCGG CGGCGTCTAT GGGATGCGCG CCAAGCTCGA CGAACGGCTG
CGCCGGATCC ACGATCTCAC CGGCCGCAAG GTCAGCCTGG TCGGCTGGAG CCTCGGCGGC
GTCTATGCGC GCGATCTCGC GCTGCACCGG CCGGAACTGG TACGCAACGT CATCACGCTC
GGCAGCCCGT TCGCGCGTGA TCTCACCGCC ACCAATGGCC GGTGGGTCTA CGAAAGACTG
TCCGGCGAGA GCCTCGACAA TGTCGCGGCG GCGGATCTGC AGGCGCTGGC CGGCGCGCTG
CCGGTGCCGA CCACCTCGAT CTATTCGCGC GGCGACGGCA TCGTGAACTG GCGCACCAGC
GTGCTGCAGC CGTCGGCCAC CGCGGAAAAC ATCGAGGTCT GTCTCGCCAG CCACATCGGG
CTCACGGTGA ATGCGGCGGT GCTGTGGGCG GTCGCCGACC GGCTGGCGCA GCCGGAGGGC
ACGTTCCGGC CGTTCGAGCG CGGCGGTCCG TTCGCCATCG CCTATGCGCG GCCACAGCCG
GCCAAGTAA
 
Protein sequence
MPDPAPSTPP LRPPSLGLLL AEARSLLELN ASLLLAPLLM QAPKGDGHPV LVLPGLLASD 
LSTALLRRFL KHLGYHSFAW GLGRNIGGVY GMRAKLDERL RRIHDLTGRK VSLVGWSLGG
VYARDLALHR PELVRNVITL GSPFARDLTA TNGRWVYERL SGESLDNVAA ADLQALAGAL
PVPTTSIYSR GDGIVNWRTS VLQPSATAEN IEVCLASHIG LTVNAAVLWA VADRLAQPEG
TFRPFERGGP FAIAYARPQP AK