| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1652 |
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| Symbol | |
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| ID | 3972575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1786912 |
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| End bp | 1788168 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637924768 |
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| Product | D-amino-acid dehydrogenase |
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| Protein accession | YP_531533 |
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| Protein GI | 90423163 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.205537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAGC GTAAAGTTGA TGTTTTGGTG CTCGGCGCCG GCGTTGTCGG CGTCAGCGCG
GCGCTGCATC TGCAGCAGCG CGGCCGCGAC GTGGTGCTGG TCGACAAGCA CGACCAGGCC
GGCGAGGAGA CCAGTTACGG CAATGCCGGG CTGATCGAAT GCGCCTCGGT GTTCCCCTAC
ATCTTCCCGC GCGATCTGCG CCACTTCCTG CGCTATTCGC TGAACCGCTC CACCGACGTG
CACTACCAAT TATCCGGTCT GCCGGACTAT CTGCTGTGGC TGATCCGCTA TTTCCTGGCG
TCGTCGCCGC AACGGTCGCT GCACAGCGCG ATGGCGGCGT TGCCGTTGAT CCGGCGCAGC
CTCACCGAGC ATGAAGCCTT GATCGAGCAG GCCGGCGTGC CGCAGCTGTT GCGCCGCACC
GGCTGGACCA AACTGTTCCG CTCCGAGGCC TCGATGGCGC GCAGCCTCAC CGAGCTGGAG
CGCGCGCGTG CGTTCGGCGT CGACGGCGAG GTGCTCGACG CCAAGGCCAT CGCCCAGCGC
GAGCCCAATC TATCCGGCCC GTTTGCAGGC GCTATTCATT GGCCGGAGCC GGGCTTCATT
CCCGACCCCG GTGCGCTGGT GAAAGCCTAC GCCGCGCTGT TCCAACGCAA CGGCGGGCGG
TTCAGTCACG GCGACGCGCG CCTGCTCGAG CAAGACGGCG CGCTGTGGCG GCTGGCGTTG
GCCGACGGCT CCAGCGTCGC CGCGCGCGAG GTGGTGGTGG CGCTCGGGCC GTGGTCGGAC
CTGGTGTTCC GCAAGCTCGG TTATCGCATC CCGCTCGGCG TCAAGCGCGG CTATCACCAG
CATTTCGTGC CGCGCGGCAA CGCCGTGCTC GGGCATCCGG TGCTGGACTC CGACCGCGGC
TATCTGCTGG CGCCGATGAA CAAGGGCATT CGCCTCACTA CCGGCGCGGA GTTCGCGCGC
CGCGACGCGC CGCCGTCGCC GGTGCAGATC GAACGCGCGA CGCCGCTCGC GCGTGAACTG
TTTCCGCTTG GCGAAGCGAT CGAGGCCACA CCGTGGATGG GCGCGCGGCC GTGCCTGCCC
GACATGCTGC CGGTGTTGGG CCCTGCGCCG CGGCATCCCG GATTGTGGTT CGACTTCGGC
CATCAGCATC ACGGCCTGAC GCTCGGCCCC GCCACCGGCC GCTTGCTGGC GGAAATGATC
ACCGGCGAGC AGCCGTTTGC CGACCCGAAG CCGTTTTCGG TCGAGCGGTT CGGCTGA
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| Protein sequence | MTERKVDVLV LGAGVVGVSA ALHLQQRGRD VVLVDKHDQA GEETSYGNAG LIECASVFPY
IFPRDLRHFL RYSLNRSTDV HYQLSGLPDY LLWLIRYFLA SSPQRSLHSA MAALPLIRRS
LTEHEALIEQ AGVPQLLRRT GWTKLFRSEA SMARSLTELE RARAFGVDGE VLDAKAIAQR
EPNLSGPFAG AIHWPEPGFI PDPGALVKAY AALFQRNGGR FSHGDARLLE QDGALWRLAL
ADGSSVAARE VVVALGPWSD LVFRKLGYRI PLGVKRGYHQ HFVPRGNAVL GHPVLDSDRG
YLLAPMNKGI RLTTGAEFAR RDAPPSPVQI ERATPLAREL FPLGEAIEAT PWMGARPCLP
DMLPVLGPAP RHPGLWFDFG HQHHGLTLGP ATGRLLAEMI TGEQPFADPK PFSVERFG
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