| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1646 |
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| Symbol | |
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| ID | 3972880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1777479 |
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| End bp | 1778969 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637924762 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_531527 |
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| Protein GI | 90423157 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.358752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGC AGCGACTGGC GCGGCTCACC GCGCTGACTG TGGTCGGCTT GGTGGCGCTG
CGGCTATTCG TCGGCGCGGT CACGCCGCTG ACCTTCGACG AAGCCTATTA CTGGATGTGG
TCGAAGCATC TGGCGGGGGG CTATTACGAC CATCCGCCGA TGGTGGCGGT GGTGATCCGG
CTCGGCACCC TGATCGCCGG CGACACCGAG TTCGGCGTCC GGCTGGTTTC GATCCTGCTC
GGACTGCCGA TGAGCTGGGC GGTGTTTCGT TCCGCCGAAA TGCTGTTTGA CGACCGCCGC
GTCGCCGCGA CCGCGACCGT GATGTTCAAC GCCACGCTGA TGGCGGCCGC CGGCACCACC
ATCGTCACCC CGGATGCGCC GCTCTTGGTC GCCTCGAGCT TCGTGCTGTA CGGCCTCGCC
AAGGTGCTTT CGACCGGGCG CGGCGCGTGG TGGCTCGGCG TCGGCGCAGC GGTCGGCGCG
GCGCTGTTAT CAAAATACAC CGCGATGTTT TTTGGCCCGG TGATCTTGAT CTGGCTGGTC
GCGGTGCCTC AGCTGCGGCA CTGGCTGCGA TCGCCTTGGC CTTACCTCGG CGGTCTGATC
GCGCTCTTGA TGTTCGCGCC GGTGATCGTC TGGAACGCCG ATCACCAGTG GGTGTCGTTC
ATCAAGCAAC TCGGGCGCGC CCGGATCGAA AGCTTCAGGC CGGGCTACCT CGCCGAATTG
CTGCCGACGC AGTTCGCGCT GGCGACGCCG CTGGTGTTCG TGCTCGGCGG CTACGGGCTC
TATGCGCTGT GGCGCCGCGG CAGCGGGGCG CCGGCGTCGC GCGCGCTGCT CAATGCCACG
GTCTGGATCA TCACCGGCTA TTTCGCCTGG CACGCCTTCC ACGCAAGGGT CGAGGCCAAT
TGGCTGAGCC CGATCTATCC GGCCTTCGCG ATCGCCGCCG CGGTTGCGGT GCATCGCGTC
GATTGGCGGC CGCTGACGCG GCGTGTGGTC GCGTTCTGCG CGCGCTGGGC GGCGCCGACC
GGGGTGGCTC TGTTCGCGAT CGCCGCGGTG CAGGCCAATA CCGGCCTGCT GACCGGTTTT
CGCCGCGACG CCACGGTGCG CACGGTCGGC GTCGGCGTGG TGCAAATGGC CGCCGAGATC
GAAGCGGTGC GGGCGCGCGT CGGCGCCGGC TGCGTGCTGG CCGACGACTA TGGCAACACG
GCGTGGCTCG CCTTCTATCT GCCGAAGGCG ACATGCGTGG CGCAACGCAC CCAGCGGATG
CGCTGGGTCA ACGCCCCGGA GCCGGATCCC GGCTTGCTCT CCGGCAAGCT GTTGCTGGTG
GGGGAGACCA ACGCCGCCGA GTTGCCGGAT TTGAAGGCGG CGTTTGCCCG AATCGAAAAG
GTCGGCGAGG TCGTGCGCCG CCGCGGACCG CTGGTGATCG AGGTGGTGGA GTTGGACCTG
CTGGAGGGCG CCCGGGGCGA GGTGTTGGAT CGCCAGCCGC CACCTTATTG A
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| Protein sequence | MTEQRLARLT ALTVVGLVAL RLFVGAVTPL TFDEAYYWMW SKHLAGGYYD HPPMVAVVIR
LGTLIAGDTE FGVRLVSILL GLPMSWAVFR SAEMLFDDRR VAATATVMFN ATLMAAAGTT
IVTPDAPLLV ASSFVLYGLA KVLSTGRGAW WLGVGAAVGA ALLSKYTAMF FGPVILIWLV
AVPQLRHWLR SPWPYLGGLI ALLMFAPVIV WNADHQWVSF IKQLGRARIE SFRPGYLAEL
LPTQFALATP LVFVLGGYGL YALWRRGSGA PASRALLNAT VWIITGYFAW HAFHARVEAN
WLSPIYPAFA IAAAVAVHRV DWRPLTRRVV AFCARWAAPT GVALFAIAAV QANTGLLTGF
RRDATVRTVG VGVVQMAAEI EAVRARVGAG CVLADDYGNT AWLAFYLPKA TCVAQRTQRM
RWVNAPEPDP GLLSGKLLLV GETNAAELPD LKAAFARIEK VGEVVRRRGP LVIEVVELDL
LEGARGEVLD RQPPPY
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