Gene RPC_1645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1645 
Symbol 
ID3972879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1776338 
End bp1777471 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content65% 
IMG OID637924761 
Productdolichyl-phosphate beta-D-mannosyltransferase 
Protein accessionYP_531526 
Protein GI90423156 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAAA CCGTCAGACC GAGCAGCATG ACCCCGCCGC ACACCCAAGG TCCGCTGCAG 
TTGTCCGTCA TCGTGCCCAC TTTCAACGAG CGCGACAATG TGACCCCGCT GTTTCAGCGG
CTGCAGATTG CCTTGTCCGG GATCGCCTGG GAGGCGGTGT TCGTCGACGA CAACTCGCCC
GACGGCACCA GCGACGTGGT GCGCGGGTTG GCCAGCGGCG ATTCCCGGGC GCGTTGCATC
CGCCGGATCG GCCGACGCGG GCTGTCCGGC GCCTGTATCG AGGGCATCCT GGCGTCCAGC
GCGCCCTATG TGGCGGTGAT CGACGCCGAC CTGCAGCACG ACGAGACCCA ACTGGCGAAG
ATGCTCGGGC TGCTGCAGGC GGGCCAAGCC GATCTGGTGA TCGGCAGCCG CTATATCGAA
GGCGGCAGCG CCGACAGTTT CAACAAACAT CGCGCCGGCG CCAGCGCGTT GGCGACCGAG
GTGGCCAAGC GCGTGCTGCG GATCGACGTC GCCGATCCGA TGAGCGGTTT CTTCATGATC
CGGCGCGAGC GCTTCGAGCA ATTGGCGCCG CAATTGTCGA CCCAGGGCTT CAAGATCCTG
CTCGACGTCA TCGCCACCGC GCACGGCGCG CTGCGCATTG TGGAAATTCC CTATACCTTT
GCCACCCGCC TGCATGGCGA GAGCAAGCTC GACTCCATGG TGATGCTGGA TTTCCTCGGC
CTGGTGTTGG CGAAATTCAC CAACGACATC GTCTCGCTGC GCTTCCTGTT GTTCGCGATG
GTCGGCTCGA TCGGCCTGTT GGTGCATTTC GCCGGGCTGT ACGTCGTGCT CGAACTGCTG
GACGTGCCGT TCGCCGAGGC ACAGGGCATC GCCGCGCTGC TCGCCATGAC CAGCAACTTC
CTGCTCAACA ATTTCCTGAC CTATCGCGAC CAGCGGCTGA AGGGCGCGCG CATCCTGCGC
GGGCTGTTGC TGTTCTATCT GGTGTGCAGC GTCGGCCTGC TCGCCAATGT CGGCGTCGCC
TTCTCGGTCT ACAACCAGCA GCCGATCTGG TGGCTGGCGG GGGCGGCCGG CGCGCTGATG
GGCGTGGTGT GGAACTACGC GATGTCCGGG CTGTTCGTCT GGCGAAAGCG ATGA
 
Protein sequence
MNETVRPSSM TPPHTQGPLQ LSVIVPTFNE RDNVTPLFQR LQIALSGIAW EAVFVDDNSP 
DGTSDVVRGL ASGDSRARCI RRIGRRGLSG ACIEGILASS APYVAVIDAD LQHDETQLAK
MLGLLQAGQA DLVIGSRYIE GGSADSFNKH RAGASALATE VAKRVLRIDV ADPMSGFFMI
RRERFEQLAP QLSTQGFKIL LDVIATAHGA LRIVEIPYTF ATRLHGESKL DSMVMLDFLG
LVLAKFTNDI VSLRFLLFAM VGSIGLLVHF AGLYVVLELL DVPFAEAQGI AALLAMTSNF
LLNNFLTYRD QRLKGARILR GLLLFYLVCS VGLLANVGVA FSVYNQQPIW WLAGAAGALM
GVVWNYAMSG LFVWRKR