Gene RPC_1643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1643 
Symbol 
ID3972877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1774769 
End bp1775233 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content68% 
IMG OID637924759 
Producthypothetical protein 
Protein accessionYP_531524 
Protein GI90423154 
COG category[S] Function unknown 
COG ID[COG5483] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.512897 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.627167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAAG CCGGCAAACC GTTGTTCACC ATCGGCTACG AGCAGACCCC GGCGCAGGCG 
GTGCTCGACG AATTGCAGCA GGCCGGCGTC AAGCTGTTGG TGGACGTCCG CGCCGTCGCA
GCGTCGCGCC GCCCGGGGTT TTCGAAGCGG CAACTTGCCG CCGGGCTCAA TGAGCGCGGC
ATCGGTTATC TGCACCTGCG CGACCTCGGC ACGCCGAAGG ACGGCCGGCA GGCTGCACGC
AGCGGCCGGT TCGAAGCGCT GCATGCGATC TACTCCGCGC ATCTGGCCAC GCCGCAGGCC
AAGGAGCAAC TCGACGAACT GGCCTCGCTG GTGGGGAAAT CCGGTCCGGT CTGCATCCTG
TGCTACGAGC GCGACCACCG CCAGTGCCAC CGGCAATGGA TCGCGGAGCG GATCGTGCAG
CGCGATGGTG TCACGGTGCA GAACCTGCTG CCGTCGCAGC TCTGA
 
Protein sequence
MAKAGKPLFT IGYEQTPAQA VLDELQQAGV KLLVDVRAVA ASRRPGFSKR QLAAGLNERG 
IGYLHLRDLG TPKDGRQAAR SGRFEALHAI YSAHLATPQA KEQLDELASL VGKSGPVCIL
CYERDHRQCH RQWIAERIVQ RDGVTVQNLL PSQL