| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1626 |
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| Symbol | |
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| ID | 3972841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1760997 |
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| End bp | 1762160 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637924742 |
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| Product | putative oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | YP_531507 |
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| Protein GI | 90423137 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.981357 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCACTTC CACCGCTGGC CTGGAACCAC TATTCATTGT ATCTCCACGT GCCTTTCTGC
CGTGCCATCT GCACCTTCTG CACTTTTGAA CGCACGCAAT ACAGCAAGTC GTCGATGGAC
GCATTCTTTG ATGCGCTCCT CGACGAGGTG GATCTGAGAG AGCAATCGGA CGATTTCACA
CAAGCGACGT TGGACTCCAT TTATCTGGGC GGCGGCACCG CCTCGCTGCT TTCCAACGAA
CAGATTTCGC AATTCCTTGG TCGCTTGCGG TCGGGCTTCG GGCTTCACGA CGATATTGAA
TGCACGCTGG AGTGCGAGCC GGGAACAAAG CGCGAAGACG ACTTTCGAGA AGTCCGCGAT
GCCGGCGTCA ATCGCGTCTC GATAGGCGTG CAGTCGTTTT CCGACCAACT ATTACCTGCA
TTGAACCGCC GGCATACCGT CGCGACGAGC TACCGGACGA TCGAGGCGGC GCACAACGCC
GGATTTTCCA ACATCCATAT CGACTTGATG TATGGGCTTC CCAACCAAAC ATTGGCCGAC
TGGAAATTTT CGGTAAACGA AGCCATACGT CTCGGAATTC AACATGTCTC GGTCTATCGT
CTCATCATCT TCCAAGACGA ACTCTTGGCG CGCAAGCTGG GCCAAGGCGA ACTACAGCCG
CCGGCAGACG CCGGCACCAT CGAAGAGATG AGGCGATATG CCCTCGAAAC GCTGCCGGCC
AACGGACTGA GACAGTACTC GCTGACCGAG TTCGCCAAGC CGGGAAACGA GTGCATCTAT
GTGCAGCGCA ATTGGGACGG ATCCGATTAT CTCGGATTCG GGCCCGCTGC CTACAGCCGC
CACGCGCATC ATCTGTGGGA AAACACCGTC TTTCATCATA GATACCACGA ACTAACTGAT
GACCATCGAT TGCCGGTCGG CAAGGGGATA ACCATGACAC CGCACGAATG TCTTGCGCGG
GATGTTGCCA TGGGCCTCTG CCTGCTGAGT GTCGACATCG CGCACGTCGA ACGACAATCG
GGCGCGAGCC TGGACGAAAT ATTCGGTCGC AAGATAGCGC AGCTCGTCGA CGACGGCCTG
CTGCGTCGAA CCCGAGATCG TATTTATCTT ACTGACGAAG GACTCCTGTA TGCCACGTAT
ATTATGAAGC GTTTCACAGC CTGA
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| Protein sequence | MALPPLAWNH YSLYLHVPFC RAICTFCTFE RTQYSKSSMD AFFDALLDEV DLREQSDDFT
QATLDSIYLG GGTASLLSNE QISQFLGRLR SGFGLHDDIE CTLECEPGTK REDDFREVRD
AGVNRVSIGV QSFSDQLLPA LNRRHTVATS YRTIEAAHNA GFSNIHIDLM YGLPNQTLAD
WKFSVNEAIR LGIQHVSVYR LIIFQDELLA RKLGQGELQP PADAGTIEEM RRYALETLPA
NGLRQYSLTE FAKPGNECIY VQRNWDGSDY LGFGPAAYSR HAHHLWENTV FHHRYHELTD
DHRLPVGKGI TMTPHECLAR DVAMGLCLLS VDIAHVERQS GASLDEIFGR KIAQLVDDGL
LRRTRDRIYL TDEGLLYATY IMKRFTA
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