| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1618 |
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| Symbol | |
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| ID | 3972833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1752757 |
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| End bp | 1753872 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637924734 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_531499 |
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| Protein GI | 90423129 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.64009 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCAC TCAAACTCAT CGGTCTGGCA TTCGGCGCCT CGTTGGCGCT GTCGACGACG
GCGCTGGCCC AGGACATCAC GGTGGCGGTG GCGGGCCCGA TGACCGGCTC GGAATCCGCG
TTCGGCCGGC AGTTGCAGAA CGGCGCCGAG CAGGCGGTGG TCGATCTCAA CGCCGCCGGC
GGCGTGCTCG GCAAGAAGCT GGCGCTGCAG GTCGGCGACG ACGGCTGCGA TCCGAAGCAG
GCGCGCTCGG TGGCGGAGAA GATCGCCGGC AGCAAGATCC CGTTCGTCGC CGGGCATTTC
TGCTCGTCGT CGTCGATCCC GGCCTCGGAA GCCTATGCCG AAGGCAATGT GCTGCAGATC
ACCCCGGGCT CGACCAACCC GTTGTTCACC GAACGCAAGC TGTGGAACGT GCTGCGGGTG
TGCGGCCGCG ACGATCAGCA GGGCCTGGTC GCCGCCGACT ACATCGTCAA GAACTACAAG
GGCAAGAACG TCGCCATCCT CAACGACAAG ACCACTTACG GCAAGGGTCT GGCCGACGAG
ACCAAGAAGG CGCTGAACAA AGCCGGCTTC ACCGAGGCGA TGTTCGAGTC TTACAACAAG
GGCGACAAGG ACTTCAACTC GATCGTGTCG CGGCTGAAGC GCGAGAACAT CGACCTGGTG
TTCGTCGGCG GCTATCACCA GGAAGCCGGG CTGATCCTGC GCCAGATGCG CGACCAGGGC
CTGAAGACCG TGCTGATGGC CGGCGACGCG ATGAACGACC GCGAATTCGC CTCGATCACC
GGGCCGCTCG CCGAGGGCAC GCTGTTCACC TTCGGCCCCG ACCCGCGCAA CAAACCGACC
GCCAAGGCGA TCGTCGAGAA GTTCAAGGCC AAGAACATCG ATCCGGAAGG CTACACGCTG
TACACCTACG CGGCGTTCCA GATCTGGTCG GAAGCCGCCA AGAAGGCCGG CACCACCGAC
CCGAAGAAGG TGATGGCCGC CATCAAGGCC GGCGAGTGGG ACACCGTGCT CGGCAAGCTG
TCGTTCGACG CCAAGGGCGA CATCAAGCTG ATCGACTACG TGGTCTACAA GTGGGACGCC
AAGGGCAACT ACGCCGAGAT CAACCCCGCG AAGTAA
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| Protein sequence | MKPLKLIGLA FGASLALSTT ALAQDITVAV AGPMTGSESA FGRQLQNGAE QAVVDLNAAG
GVLGKKLALQ VGDDGCDPKQ ARSVAEKIAG SKIPFVAGHF CSSSSIPASE AYAEGNVLQI
TPGSTNPLFT ERKLWNVLRV CGRDDQQGLV AADYIVKNYK GKNVAILNDK TTYGKGLADE
TKKALNKAGF TEAMFESYNK GDKDFNSIVS RLKRENIDLV FVGGYHQEAG LILRQMRDQG
LKTVLMAGDA MNDREFASIT GPLAEGTLFT FGPDPRNKPT AKAIVEKFKA KNIDPEGYTL
YTYAAFQIWS EAAKKAGTTD PKKVMAAIKA GEWDTVLGKL SFDAKGDIKL IDYVVYKWDA
KGNYAEINPA K
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