| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1598 |
|---|
| Symbol | |
|---|
| ID | 3973137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 1732906 |
|---|
| End bp | 1734165 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637924714 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_531479 |
|---|
| Protein GI | 90423109 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1262] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR03440] conserved hypothetical protein TIGR03440 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.785472 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGAAAC CAGCATCCGC CGCGGCAGCC TTGGCCGCCC CTTGCCCGTC ATCACGTTCC
CCATCCGAGT CCGGCGAACT GTCGCAGCAG CTGTTGCAAG CCTACCGCAC GGTCCGCGAG
GAAACCGAGC GCCGCGCCGC GCCGCTGTCG CCCGAGGACC AGGTGGTGCA GTCGATGCCG
GACGCCAGCC CGGCCAAATG GCACCGCGCC CATACCACCT GGTTCTTCGA GCAGTTCCTG
CTCGGCCAGC ATTGCCCGGG CTATGCGCCG TTTCATCCCG ACTACGCCTA TCTGTTCAAT
TCCTATTACG TCAGCGCCGG CCCGCGCCAC GCCCGCAACC AGCGCGGCTT GCTGACCCGT
CCGGGTGCGG CCGAGGTCGC CGCCTATCGT GCCCATGTCG ACGCCGCGAT CGCAGAGTTT
TTCGGCAGCG CCGACCAGGC GACGCTGAGC GAGCTCGCGC CATTGCTCGA GGTCGGGCTG
AACCACGAAC AGCAGCACCA GGAATTGCTG CTGACCGACA TCCTGCACGC CTTCGCGCAG
AACCCGATCC CGCCGGCCTA TCAGCCCGGC TGGCGCTTCC CCGACGCGCA GCGCGGCGAC
GACTGGGTGA GCCTCAACGA GGGCATTCAT CCGATCGGCC ACGCCGGCGA GGCGTTTCAT
TTCGACAACG AGACCCCGCA GCACCGCGCC CTGGTCGGGC CGGTGAAGAT TTCGCGCAAC
CTCGTGACCA ACGCCGAGTG GCTGGAGTTC ATCGCCGCCG GCGGCTACCG GACGCCGACG
TTGTGGCTGA TGGACGGCTT CGCCGCGGTC GAGCGCGACG GCTGGGAGGC CCCCGGGCAT
TGGCGCAAGG TCGACGGCTC CTGGCACATC ATGACGCTCG GCGGCTTGCA GCCGGTCGAT
CCCGACGCGC CGGTGTGCCA CGTCAGCTAC TACGAGGCCG ATGCGTTTGC GCGCTGGCGC
GGCCAACATC TGCCGACCGA GATGGAGTGG GAGGTCGCGG CGCGCGCCGG CGCGTTGAAC
GACGCGTTCG GTCTGGTTTG GCAATGGACC CGCAGCGCCT ACGCGCCCTA CCCGGGCTAT
CGCGCGGTCG AAGGCGCGCT CGGCGAATAC AACGGCAAGT TCATGGTCAA TCAGCTGGTG
CTGCGCGGCT CGTCGCTGGC CACGCCTGAG GGCCACAGCC GCATCAGCTA TCGCAACTTC
TTCTATCCGC ATCATCGCTG GCAATTCACC GGCCTGCGTC TGGCCAACTA CGGCGGCTGA
|
|---|
| Protein sequence | MTKPASAAAA LAAPCPSSRS PSESGELSQQ LLQAYRTVRE ETERRAAPLS PEDQVVQSMP
DASPAKWHRA HTTWFFEQFL LGQHCPGYAP FHPDYAYLFN SYYVSAGPRH ARNQRGLLTR
PGAAEVAAYR AHVDAAIAEF FGSADQATLS ELAPLLEVGL NHEQQHQELL LTDILHAFAQ
NPIPPAYQPG WRFPDAQRGD DWVSLNEGIH PIGHAGEAFH FDNETPQHRA LVGPVKISRN
LVTNAEWLEF IAAGGYRTPT LWLMDGFAAV ERDGWEAPGH WRKVDGSWHI MTLGGLQPVD
PDAPVCHVSY YEADAFARWR GQHLPTEMEW EVAARAGALN DAFGLVWQWT RSAYAPYPGY
RAVEGALGEY NGKFMVNQLV LRGSSLATPE GHSRISYRNF FYPHHRWQFT GLRLANYGG
|
|---|
| |