Gene RPC_1595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1595 
Symbol 
ID3973134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1729671 
End bp1730783 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content67% 
IMG OID637924711 
Productlow temperature requirement A 
Protein accessionYP_531476 
Protein GI90423106 
COG category[S] Function unknown 
COG ID[COG4292] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.622684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.393956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTCTTCG ACCTGGTGTT CGTGTTCGCC ATCACCCAGA TCTCGCATTT TCTGCTGGCG 
CATTTCACCG TGCAGGGCCT GCTGCAGAGC GCGATCCTGA TGCTCGCGGT GTGGTGGGTG
TGGGTCTACA CCTCCTGGAT CACCAACTGG CTGGATCCGG AACAGACCGC GGTGCGGCTG
ATGCTGTTCG CGCTGATGGC GCTCGGGCTG TTGCTGTCGA CCTCGATTCC CAAAGCGTTC
GAGAGCCGCG GGCTCGCCTT CGGGCTGGCG TTCGCGGCGA TGCAGGTCGG CCGCACCGCG
TTTTTCACCT ATTCGGTGCC GGCCTCGCAA GCCAAGCTGA AGACCAGCTT CCTGCGCATC
CTGCTGTGGC TGAGCGCCAG CGGCGCGCTG TGGATCGCAG GCGGCCTCTT GCACGGCGCA
GCGCAACTCG GGCTGTGGCT GACCGCGTTG CTGATCGAAT ATGTCGGGCC GGTGGCGCGG
TTCTGGGTGC CGCGGCTCGG CGCCTCCTCG ACCACCGACT GGAGCGTCGA GGGCGGCCAC
ATGGCGGAGC GCTGCGCGCT GTTCATCATC ATCGCGCTCG GCGAATCGAT CGTCGTCACC
GGCACCACTT TCGCCGAGAT CGACTGGACC GTGACCACGA TGAGTTCGTT CGCGGTGGCG
CTGCTCGGCT CGATCGCAAT GTGGTGGATC TATTTCCACA TCGGCGTCCA TGTCGGCGCC
GAGCGGATCT CGCATTCCAG CGATCCGGGG CGGCTGGCGC GGCTGGCCTA CACCTATCTG
CATCTGCCGA TCGTGGCGGG CATCGTGGTG ACCGCGGTCG GCGACGAATT GCTGCTGGCG
CATCCCGACG GCCATGGCGA CGTCAAGGCG ACGTTCGGGA TGATCGGCGG GCCGCTGTTG
TTCCTGTTCG GCGTGCTGCT GTTCAAGCAG AGCGTGCACG GCCGCTGGCA GTTGTCGCAT
CTCGCCGGCA TCGCCGCGCT GGTGTTGCTG ACGCCGTTCG GCGGATTGCT GTCGCCGCTG
CTGCTGGCCG CCGCCGCCAC GGCGATCCTC CTGGTGGTCG GCGCCTGGGA GGCGATCTCG
CTCGGCGTCG GCGACCGCTC GCCGATCGAG TAG
 
Protein sequence
MFFDLVFVFA ITQISHFLLA HFTVQGLLQS AILMLAVWWV WVYTSWITNW LDPEQTAVRL 
MLFALMALGL LLSTSIPKAF ESRGLAFGLA FAAMQVGRTA FFTYSVPASQ AKLKTSFLRI
LLWLSASGAL WIAGGLLHGA AQLGLWLTAL LIEYVGPVAR FWVPRLGASS TTDWSVEGGH
MAERCALFII IALGESIVVT GTTFAEIDWT VTTMSSFAVA LLGSIAMWWI YFHIGVHVGA
ERISHSSDPG RLARLAYTYL HLPIVAGIVV TAVGDELLLA HPDGHGDVKA TFGMIGGPLL
FLFGVLLFKQ SVHGRWQLSH LAGIAALVLL TPFGGLLSPL LLAAAATAIL LVVGAWEAIS
LGVGDRSPIE