Gene RPC_1587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1587 
Symbol 
ID3972935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1722551 
End bp1723252 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content67% 
IMG OID637924703 
Productphosphoribosylformylglycinamidine synthase I 
Protein accessionYP_531468 
Protein GI90423098 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0047] Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain 
TIGRFAM ID[TIGR01737] phosphoribosylformylglycinamidine synthase I 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0863769 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCCG CCATCCTCGT TTTCCCCGGT ATCAATCGCG AGCGCGACAT GGCGCGGGCG 
CTGCAGCTCG CCTCCGGCTC CGAGCCCGCG ATGGTATGGC ACGCAGACAC CGAACTGCCG
AAGGGCACCG ACCTCGTGGT GGTGCCGGGC GGCTTTTCCT ATGGCGATTA CTTGCGCTGC
GGCGCGATCG CGGCGCGCGC GCCGGTGATG GACGCGGTGC GCAAATTCGC CAGTGACGGC
GGGCTGGTGC TCGGGGTCTG CAACGGCTTC CAAATCCTGT GCGAGTCGGG GCTGTTGCCG
GGCGTCTTGA TGCGCAACGC GCGCTTAAAA TTCATCTGCC ACGACGTGCA TCTGCGGGTC
GAGCGCTCCG ATACGCCGTT CACCCGCGGC TACAATGCCG GCCAGGTGAT CCGCGTCCCG
GTGGCGCATG GCGAGGGCAA TTACGAAGCC GACGAAGAGA CGCTGCAGCG GCTCGAGGGC
GATGGCCGGG TGCTGTATCG CTATTGCTCG GCGAGCGGCG AAGTCGGCGA GGCGCACAAC
ATCAACGGCG CCGCGGCCTC GATCGCCGGC ATCGTCTCCG AGCGCGGCAA CGTGCTCGGC
ATGATGCCGC ATCCGGAGAA CCACGTCGAA GCCATCATGG GCTGCACCGA TGGCCGCGGC
CTGTTCGCCG GCCTGGTCGA GCACCTCGCC AAGGCGGCGT AA
 
Protein sequence
MKSAILVFPG INRERDMARA LQLASGSEPA MVWHADTELP KGTDLVVVPG GFSYGDYLRC 
GAIAARAPVM DAVRKFASDG GLVLGVCNGF QILCESGLLP GVLMRNARLK FICHDVHLRV
ERSDTPFTRG YNAGQVIRVP VAHGEGNYEA DEETLQRLEG DGRVLYRYCS ASGEVGEAHN
INGAAASIAG IVSERGNVLG MMPHPENHVE AIMGCTDGRG LFAGLVEHLA KAA