Gene RPC_1582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1582 
Symbol 
ID3972930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1720121 
End bp1720450 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content59% 
IMG OID637924698 
Producthypothetical protein 
Protein accessionYP_531463 
Protein GI90423093 
COG category[S] Function unknown 
COG ID[COG4679] Phage-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.464954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0435717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCGG TCGTCTTCAT CGGAGATTCC CTCGACGCGG TGCGATTATT TCCTGACGAC 
GCGCGCCGCG CGGTGGGTTT CCAGATCGAC CGCCTGCAGC GTGGTCTTGA TCCGGACGAC
TGGAGGCCGA TGAAAACCAT CGGCGCAGCC GTGCGGGAAA TCCGGGTGCG AGATGCATCC
GGCGCCTTTC GCGTGATCTA TATCGCCACG CTCGCAGACG CCGTTTACGT GCTGCATGCT
TTTCAAAAGA AGACCGAGGC GACATCGAAA CGCGACATCG ATCTCGCCAC CGCGCGTTTC
AAAGAGCTGA CGCGAAGAGA ACGACAATGA
 
Protein sequence
MKPVVFIGDS LDAVRLFPDD ARRAVGFQID RLQRGLDPDD WRPMKTIGAA VREIRVRDAS 
GAFRVIYIAT LADAVYVLHA FQKKTEATSK RDIDLATARF KELTRRERQ