| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1578 |
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| Symbol | |
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| ID | 3972926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1717797 |
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| End bp | 1718033 |
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| Gene Length | 237 bp |
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| Protein Length | 78 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637924694 |
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| Product | virulence-associated protein |
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| Protein accession | YP_531459 |
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| Protein GI | 90423089 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4456] Virulence-associated protein and related proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.962884 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0411245 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCGACC CGAGGCACGT CAAATTGTTT CGCAACGGCC GCAACCAGGC GGTCCGCATC
CCGGTGGATT TCGAGTTGCC GGGGGATGAA GCCCTCATGC ACCGCGACGG CGACCGGCTG
GTGATTGAGC CGTTGCGCAA GCGCGGCTTG GTCGCCCTGC TGCAATCGAT GACGCCGCTC
GAGGAGGAAT TCCCGCAGAT CGACGATCCG GTCGGAATTC GCCGGATGAG CATGTAG
|
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| Protein sequence | MSDPRHVKLF RNGRNQAVRI PVDFELPGDE ALMHRDGDRL VIEPLRKRGL VALLQSMTPL
EEEFPQIDDP VGIRRMSM
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