| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1574 |
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| Symbol | |
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| ID | 3972922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1711120 |
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| End bp | 1712160 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637924690 |
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| Product | transposase IS116/IS110/IS902 |
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| Protein accession | YP_531455 |
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| Protein GI | 90423085 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3547] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00168491 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAGCAGA TTATCCGCAT TGGGATGGAT ACGTCGAAGC ATTTTTTCCA GCTGCACGGG
GTCGATGCCG CCGAGAAGCC GGTGCTGCGC AAGAAGCTGC GGCGCAAGGA GATGCTGGCG
TTCTTCGCCA AGCTGCCGCC GACGCCGATC GGGATCGAGG CCTGCGGTGC GGCGCACTAC
CTGGCGCGGG AGCTGGGCAA ACTCGGCCAC GTGGTGAAGC TGTTGGCGCC GCAGCACGTC
AAGCCTTACG TCAAGCGCAA CAAGAACGAC GGGCGCGACG CCGAGGCGTT GTGCGAGGCG
ATGAGCCGGC CGACGATGGA GTTCGTGCCG GTGAAGACCG CGGAGCAGCA GGCGGCGCTG
ATGCTGATGG GACTGCGGCA GCAGCTGATC GCAAGGCGTA CCCAGCTGAG CAATGCGATT
CGCGGTTATG CCGCGGAATT CGGCCTGATC TCGCCGAGAG GTCTCGACAA GATCGAGCCG
CTGCTGTTGC GGATCGCGCA GGACGACACC GTGCCGACGC TGGCGCGCGA GCTGTTCGCG
CTGCAGGGCC AGGACTACGC GCGACTGCAG AATGAGCTGA AGGTGATCGA CGCCAAGCTG
TTGGCCTGGC ATCGCGCCGA CGCCTGCAGC CGGCGGCTGG CGCAGATTCC CGGAGTAGGA
CCGATCGGCG CCAGTGCGCT GGTGATGAAA ACGCCGGTGC CGCAGACCTT CGCCTCGGCC
AGGGCCTTTG CGGCCTGGCT CGGCTTGACG CCGAAGGATC ATTCCACCGC CGGCAAGCTT
CGGCTCGGCA CCATCACCCG CGCCGGCGAT GAACTGCTAC GCAGCCTGTT GGTGGCGGGA
GCGACCGCGG TGATCCAGCA GGTGCGCCGT GGCCGCGGCC GGGCGTCGCC GTGGTTGCTG
GCGCTGCTGG CGCGCAAGCC GCCCAAGCTC GCGGCGGTAG CGCTCGCCAA CAAGATCGCC
CGGATCGCCT GGAAGCTGAT GCTGACCGGA GAAAATTACG ACGGCGCGCG GATGCTGAAC
GCATCGCCGC ACGCCGCCTG A
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| Protein sequence | MEQIIRIGMD TSKHFFQLHG VDAAEKPVLR KKLRRKEMLA FFAKLPPTPI GIEACGAAHY
LARELGKLGH VVKLLAPQHV KPYVKRNKND GRDAEALCEA MSRPTMEFVP VKTAEQQAAL
MLMGLRQQLI ARRTQLSNAI RGYAAEFGLI SPRGLDKIEP LLLRIAQDDT VPTLARELFA
LQGQDYARLQ NELKVIDAKL LAWHRADACS RRLAQIPGVG PIGASALVMK TPVPQTFASA
RAFAAWLGLT PKDHSTAGKL RLGTITRAGD ELLRSLLVAG ATAVIQQVRR GRGRASPWLL
ALLARKPPKL AAVALANKIA RIAWKLMLTG ENYDGARMLN ASPHAA
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