Gene RPC_1552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1552 
Symbol 
ID3971685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1684413 
End bp1684988 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content61% 
IMG OID637924667 
Producthypothetical protein 
Protein accessionYP_531433 
Protein GI90423063 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00010776 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.039925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGATCC GGGATGCCTT TGGCGACGGC GCCTCGCACG GCGTGATCGT AAAGACCTAT 
TCGGTAACGC ACCTCGTAAA GGAAGCGCAG GGCCGCTATT CGCCAGCCGC CGTAGTAGCC
GTAAGCAAGG AAGTCGTGAC CGGCGACCCC GACCAATACA TTTCCACCAG CTATGTGGAG
CGCCAGAATC TCTCCCTGCG CATGGGATCG CGCCGGTTCA CCCGCCTGAC TAACGGCTTT
TCAAAGAAGC TGGACAACCA CGTCGCAGCG GTCGCGCTGT ATGTCGCGCA CTACAACCTT
TGCCGGGTTC ACGAAGCCCT CCGCACCACC CCTGCGAAGG CCATTGGCGT CGCGGATCGG
ACTTGGAGCA TTGCCCAGCT TGTGGACGCT GCGCTTGCGG TTGCCCCGGC AATGCCGACT
GAGACCCCGC CGGATCGGCG CCGAAAATTT ACGCGTGAGG TAGCTACTTG CAGCCGCCAA
CGGTCATATT GGAGCGGTAT CCTGTCACGG AGCCACTCCC TCCGCTTTCC ACCGTTACGC
TCATGCTGCT GCCGGGGCCA ACATAAGTTC CGATAG
 
Protein sequence
MAIRDAFGDG ASHGVIVKTY SVTHLVKEAQ GRYSPAAVVA VSKEVVTGDP DQYISTSYVE 
RQNLSLRMGS RRFTRLTNGF SKKLDNHVAA VALYVAHYNL CRVHEALRTT PAKAIGVADR
TWSIAQLVDA ALAVAPAMPT ETPPDRRRKF TREVATCSRQ RSYWSGILSR SHSLRFPPLR
SCCCRGQHKF R