Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1552 |
Symbol | |
ID | 3971685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 1684413 |
End bp | 1684988 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637924667 |
Product | hypothetical protein |
Protein accession | YP_531433 |
Protein GI | 90423063 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00010776 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.039925 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGATCC GGGATGCCTT TGGCGACGGC GCCTCGCACG GCGTGATCGT AAAGACCTAT TCGGTAACGC ACCTCGTAAA GGAAGCGCAG GGCCGCTATT CGCCAGCCGC CGTAGTAGCC GTAAGCAAGG AAGTCGTGAC CGGCGACCCC GACCAATACA TTTCCACCAG CTATGTGGAG CGCCAGAATC TCTCCCTGCG CATGGGATCG CGCCGGTTCA CCCGCCTGAC TAACGGCTTT TCAAAGAAGC TGGACAACCA CGTCGCAGCG GTCGCGCTGT ATGTCGCGCA CTACAACCTT TGCCGGGTTC ACGAAGCCCT CCGCACCACC CCTGCGAAGG CCATTGGCGT CGCGGATCGG ACTTGGAGCA TTGCCCAGCT TGTGGACGCT GCGCTTGCGG TTGCCCCGGC AATGCCGACT GAGACCCCGC CGGATCGGCG CCGAAAATTT ACGCGTGAGG TAGCTACTTG CAGCCGCCAA CGGTCATATT GGAGCGGTAT CCTGTCACGG AGCCACTCCC TCCGCTTTCC ACCGTTACGC TCATGCTGCT GCCGGGGCCA ACATAAGTTC CGATAG
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Protein sequence | MAIRDAFGDG ASHGVIVKTY SVTHLVKEAQ GRYSPAAVVA VSKEVVTGDP DQYISTSYVE RQNLSLRMGS RRFTRLTNGF SKKLDNHVAA VALYVAHYNL CRVHEALRTT PAKAIGVADR TWSIAQLVDA ALAVAPAMPT ETPPDRRRKF TREVATCSRQ RSYWSGILSR SHSLRFPPLR SCCCRGQHKF R
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