Gene RPC_1542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1542 
Symbol 
ID3971675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1678989 
End bp1679663 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content69% 
IMG OID637924657 
ProductDSBA oxidoreductase 
Protein accessionYP_531423 
Protein GI90423053 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2761] Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.208286 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCCA AGCCGCTGCA GATCGACATC GTCTCCGACG TGGTGTGCCC GTGGTGCTAC 
ATCGGCAAGC ACCGGCTGGA GGCCGCGCTG GCCCTGGTGC CGGAGGTCGC GGTGGAAACG
CGTTGGCGGC CGTTCTTCCT CAATCCAGGG GTGCCGCGCG AAGGCGTCGA TCGCGACAGC
TATCTCACCG CCAAATTCGG CTCGGTGGAG GCCTACAAGG CGATCGCCGG CCGCGTGGCC
GAGGCCGCGG CGGCGGAGGG GCTGGCGTAT CGGCCGGAGC TGGTGCGGCG CCAGCCCAAC
ACCATCGATT GCCACCGCTT GATTCATTGG GCTGAGCTTG ACCCGTCCGG CGACAAATCG
GCGGCGATGA AGCAGCGGTT GATGGAATTG TATTTTCGCG ACGGCGGCGA TCTCACCGAC
ATCGAAGTGC TGGTGAAGGC CGCGGCCGAT TGCGGCCTCG ACGGCGACGC GGTGCGGCGG
CGGCTGGCCA GCGACGAGGA CGTCGCGCTG ATTGCGACGC AGGCCAAGGA CGCCGCCGAC
AAGGGCATTT CCGGGGTGCC GACCTTCGTG TTCGCCGGCA AGTATGCGGT GTCCGGCGCG
CAGCCGGCCG AGCAACTGGC CGGCGCGATC CGTCAGGTCG CGGCCGAGCT GAAGGCCGAC
ATCGCCCCGG CCTAG
 
Protein sequence
MSAKPLQIDI VSDVVCPWCY IGKHRLEAAL ALVPEVAVET RWRPFFLNPG VPREGVDRDS 
YLTAKFGSVE AYKAIAGRVA EAAAAEGLAY RPELVRRQPN TIDCHRLIHW AELDPSGDKS
AAMKQRLMEL YFRDGGDLTD IEVLVKAAAD CGLDGDAVRR RLASDEDVAL IATQAKDAAD
KGISGVPTFV FAGKYAVSGA QPAEQLAGAI RQVAAELKAD IAPA