Gene RPC_1537 details

Gene Information

• Locus tag: RPC_1537
• ID: 3971973
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris BisB18
• Kingdom: Bacteria
• Replicon accession: NC_007925
• Strand: +
• Start bp: 1674096
• End bp: 1674839
• Gene Length: 744 bp
• Protein Length: 247 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 637924652
• Product: TetR family transcriptional regulator
• Protein accession: YP_531418
• Protein GI: 90423048

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.313453
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.341232
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGCAAAC CGGCCAAGAC AGCCAAAGCG AGCAAACCCG CAACCCTCCG CGCCGCGCCG 
CGGCCGCGCA AGCCGGGGGC GAAACCCGGC GCGAAGCGGG CCGCCAAGCC GACCCAAGCG 
GCGACGCCCT ATCATCACGG CGCGCTGCGC GACGCGTTGC TCGCGGCGGC CGAAACCCTG 
CTGCAGCGCG ACGGCTTGGC CGGGCTGACG CTGCGCGCGG TGGCGCGTGA GGCGGGCGTG 
TCGCACGCCG CCCCGACGCA TCATTTCGGC GACCTCGCGG GTCTCGTCAG CGACCTCGCG 
GCGATCGGGT TTCAGCGCTT CAACGCCGCG ATGGCGGCGG CCGGCGCGGG CGACGGCGCG 
CCGCTGGAGA AGGCGCTGCG CCGCGCGCTG GCCTATCTGG CCTATGCCCG CGCCCATCCG 
GCGATGTATC TGCTGATGTT CCGCACCGAG CGGCTCGATA TGCGCAGGCC GGCGCTGCGC 
GAGGCCGCGG AGGCGGCGTT CGCCGGATTG ACCGGGGCGA TCGGCATTGC GCCTCAGCAC 
CGCAGCGGCG ATCCGGCGGC GCCGCAGGCG CTGTCGCTGG AGCAGGCGGC GGAGGTCGTG 
CGGGCCTGGT CGTTGGTGCA CGGCTACACC ACGCTGCTGC TCGACGGCCG GCTCGCCGAG 
CTGATGAGCC TGCTGCCCGA AGGCAGCGAT CCGGAGACGC TGTTCGTGGC GATGCTGAAA 
TCCACGGTGC GGCCGCCGCT GTGA 

 

Protein sequence

MGKPAKTAKA SKPATLRAAP RPRKPGAKPG AKRAAKPTQA ATPYHHGALR DALLAAAETL 
LQRDGLAGLT LRAVAREAGV SHAAPTHHFG DLAGLVSDLA AIGFQRFNAA MAAAGAGDGA 
PLEKALRRAL AYLAYARAHP AMYLLMFRTE RLDMRRPALR EAAEAAFAGL TGAIGIAPQH 
RSGDPAAPQA LSLEQAAEVV RAWSLVHGYT TLLLDGRLAE LMSLLPEGSD PETLFVAMLK 
STVRPPL