| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1536 |
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| Symbol | |
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| ID | 3971972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1672584 |
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| End bp | 1673987 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637924651 |
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| Product | carotenoid oxygenase |
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| Protein accession | YP_531417 |
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| Protein GI | 90423047 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0771367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.379655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTCG CCGAAGCGAT CGTCCCTGTG CGCGACAATC TCGCGCCGAT CTTTGTCGAA
TACGATCAGA CCGATCTGCT GGTCGAAGGC GAATTGCCGC GCGAATTGAA CGGCACGCTG
TATCGCAACG GCGCCAATCC GCAGTTTCCC ACGGCCGGCT CGCACTGGTT CTTCGGCGAC
GGCATGCTGC ACGCGTTTCA TCTCGAGAAC GGCCGCGCCA GCTATCGCAA CCGCTGGGTC
CGCACGCCGA AATGGCTGGC CGAGCACGAC GCCGGCAAAG CGCTATTCGG CGGCTTCAAC
CGCAAGCTTG CCGGCGTGGC GAAGTCGGTA ACCAGCGACG GCGGCGTCGC CAACACCAAC
GTTTTGTACC ACGCCGGCAA ATTGCTGGCG CTGGAGGAAG GCCATCCGCC GACCGAAATC
GAGCGCGATA CGCTGGCGAC CCGTGGCTAT TGCGATTACG GCGGCGCGAT CGGCGGGCCG
TTCACCGCGC ATCCGAAGAT CGATCCGGTG ACCGGCGAAA TGCTGTTCTT CGGCTACAAC
GCCACCGGGC TCCTCACCGC CGGGATGTCG GTCGGTTCGA TCGACCGCGC CGGCAAAGTC
ACGCGGTTCG ATCGCTTCAA ATCGCCCTAT GCGGCGATGG TGCACGATTT CATCGTCACC
GAGCGGCACA TCCTGTTTCC GATCCTGCCG CTGACCGGCA GCCTGTGGCG GGCGATGCGC
GGCAAGCCGC CTTATGCCTG GGAGCCCGGC AAGGGCTCCT ACGTCGGCGT GATGAAGCGC
GACGGCAAGA CCCGCGACAT CGTCTGGTTT CGCAGCGAGG CCTGCTTCGT GTTCCACGTC
ATGAACGCCT GGGAAGACGG CGACCGCATC GAAGCCAACG TCATGCAATC CGAACAGGTG
CCGCTGTTCA CCGATGTCGA CGGCAAGCCG ACCGACCCGG AAAAATCCCG CGCCAGGCTG
TGCCGCTGGA GCTTCGACCT CAGCGGCAAC ACCGACCGCT TCACCCGCCG CTATCTCGAC
GACGTCACCG GCGAATTCCC GCGCATCGAC GAGCGCCGCT TGGGCTTGCG CAGCCGCCAC
GGCTGGTACG CCTGCGCCGA TCCGGCGCTG CCGATCGGGC TGTCGCTGGC CGGCCTGGTC
CATGTCGACG GCGACGGCGC CCGCCGCGGC CACTACATGC TGCCGGTCGC CGACAGCGTG
TCGGAGCCGG TGTTCGTACC GCGCAGCAAG GACGCCGCCG AGGGTGACGG CTGGTTGCTG
GTGGTGATCT GGCGCGGCCG CGAGAACCGC AGCGACCTCG CGGTGTTCAA CGCCACCGAC
ATCGACCAAG GACCGATCGC GCTGGTCAAG CTCGACCACC GCGTGCCGGA CGGTTTTCAC
GGCAATTGGG TGGCGGCGGA GTAG
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| Protein sequence | MPLAEAIVPV RDNLAPIFVE YDQTDLLVEG ELPRELNGTL YRNGANPQFP TAGSHWFFGD
GMLHAFHLEN GRASYRNRWV RTPKWLAEHD AGKALFGGFN RKLAGVAKSV TSDGGVANTN
VLYHAGKLLA LEEGHPPTEI ERDTLATRGY CDYGGAIGGP FTAHPKIDPV TGEMLFFGYN
ATGLLTAGMS VGSIDRAGKV TRFDRFKSPY AAMVHDFIVT ERHILFPILP LTGSLWRAMR
GKPPYAWEPG KGSYVGVMKR DGKTRDIVWF RSEACFVFHV MNAWEDGDRI EANVMQSEQV
PLFTDVDGKP TDPEKSRARL CRWSFDLSGN TDRFTRRYLD DVTGEFPRID ERRLGLRSRH
GWYACADPAL PIGLSLAGLV HVDGDGARRG HYMLPVADSV SEPVFVPRSK DAAEGDGWLL
VVIWRGRENR SDLAVFNATD IDQGPIALVK LDHRVPDGFH GNWVAAE
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