| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1535 |
|---|
| Symbol | |
|---|
| ID | 3971971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 1671634 |
|---|
| End bp | 1672362 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637924650 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_531416 |
|---|
| Protein GI | 90423046 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0321654 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.49585 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGCCG CGTCGCGTCG TCATTGCCTG GCGCTTCTCG TTGTTCCCCT GTTGCTGATC
TCGGGCGCTG CGGTCAATGC GCAGTCGATC ATCATCGCCG AAACCACGCT TGTTACGCTG
ACGTCGTCGG CCAACCCCGC CACCGCCGAT GAGCCGTTCA CGCTTACCGC CGCGGTGACC
ACGCCGCAGG GCGGCGGCGT GCCCGGCGGC AGCATCCAGT TCATCGACGA AACCACGCTG
GCGGTGCTGG GCTGGGCCGA CGTCGCTTCG CCGCGGATCA TCGTGCGCGA TCTGCCGCCG
GGGCGGCACG CGATCCGTGC CGATTACAGC GGCAGCCAGG ACTATCTGCC GCTGATCGTG
CAGCCGGGGC AATCCGCGCC GTTGCAGCTC AGCGTGCTGG CAAAGCCGCG GGTGCTGCTG
TCGTCGTCGC AAAATCCGAT CTCGCCGGGC GAGGTGGTGA CGCTCTGCGT CACCGTCACC
GGCAAGACCG CGGCGGCGAA AGGATTCGTG ACGTTGCGCG ACGGCGACGC AGTGCTCGCC
GCGCATCTCG CGCTCGATAG TTCCGGCACC GCGCGGTTCA CCACCTCGGC CTTGGCGCCG
GGTTGGCGCG CGCTCACCGC CAGCTACGAG GGCGACGCCG AGCACGCGCC GACGCTTTCG
ATGCCGCTCG ATCAGAGCGT CGGCGTGGCG CTGCTTCGCG ACGCGCAAGC CCTGCCGCGA
GGCATGTAG
|
|---|
| Protein sequence | MRAASRRHCL ALLVVPLLLI SGAAVNAQSI IIAETTLVTL TSSANPATAD EPFTLTAAVT
TPQGGGVPGG SIQFIDETTL AVLGWADVAS PRIIVRDLPP GRHAIRADYS GSQDYLPLIV
QPGQSAPLQL SVLAKPRVLL SSSQNPISPG EVVTLCVTVT GKTAAAKGFV TLRDGDAVLA
AHLALDSSGT ARFTTSALAP GWRALTASYE GDAEHAPTLS MPLDQSVGVA LLRDAQALPR
GM
|
|---|
| |