Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1533 |
Symbol | |
ID | 3971969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1668972 |
End bp | 1670627 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637924648 |
Product | tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit |
Protein accession | YP_531414 |
Protein GI | 90423044 |
COG category | [C] Energy production and conversion |
COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.639003 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCC CCACGCCGAT CCCGTCCGCC GCCACCCCGG TTCCGCCGTA CAAGCACACC CCGTTGTTCC CGCTCGGCAA AGACGAGACG CCGTACCGCA AGATCACCTC TGAGGGCGTC CGGGTCGAGA CCGTGCTCGG GCGTGCCATG CTGGTGGTGG AGCGCGAGGC GCTGCGGGCG CTGTCGGAGG CCGCGTTCGG CGACATCAAC CATTATCTGC GGCCGCAGCA TCTGCAGCAG CTGCGCAACA TCCTCGACGA CAACGACGCC AGCCCGAACG ACAAGTTCGT GGCATTGGAC TTCTTGAAGA ACGCCAATAT CGCCGCCGGC GGCGTGCTGC CGATGTGCCA GGACACCGGC ACCGCGATCA TCATGGGCAA GAAGGGCTTC AACGTCATCA CCGACGGCAG CGACGAGGCG GCTTTGAGCG AAGGCGCGCG CGACGCCTAT CTGCGCCGCA ATCTGCGCTA TTCGCAGGTG GCGCCTTTGT CGATGTATGA AGAGAAGAAC ACCGCCAACA ACATGCCGGC GCAGTGCGAG ATCTATGCCG AGGGCGATGA CGCCTACAAA TTCATGTTCA TGGCCAAGGG CGGTGGCTCG GCCAATAAGA GCTTCCTGTT CCAGGCGACG CCGTCGGTGC TGACCAAGGA TCGGCTGCTG GCGTTCCTGA AAGAGAAGGT GCTGACGCTC GGCACCGCGG CGTGCCCGCC CTATCATCTG GCGATCGTGA TCGGCGGCAC TTCGGCCGAA CTGTGCATGA AGACGGTGAA GCTGGCGTCG GCGAAATATC TCGATGCGCT GCCGACCCAT GGCTCCGAGA ACGGCAACGG GTTTCGCGAC CTGGAGATGG AGCAAGAGAT CCTGAAGATG ACGCAGTCGC TCGGGGTCGG CGCGCAGTTC GGCGGCAAGT ATTTCTGCCA CGACGTCCGG GTGATCCGGC TGCCGCGCCA CGGCGCCTCG CTGCCGATCG GGCTTGGCGT GTCGTGCTCG GCGGATCGCC AGGTGCTCGG CAAGATCACC AAGGACGGTG TGTATCTTGA AGAACTCGAG CACAACCCGG CGCGCTTCCT GCCCGAAGTC GAGCAGGCGC TCGGCGGCGA GGTGGTGCAG ATCGACCTCA ACCAGCCGAT GCAAGAGATT CTCGCGACCT TGAGCAAATA TCCGACCAAG ACCCGGCTGT CGCTCTCCGG CACCATGATC GTCGCGCGGG ATTCCGCGCA CGCCAAGCTG CGCGAGCGGC TGGACAACGG CGAGCCGCTG CCGGACTACT TCAAGAACCA TCCGGTGTAT TACGCCGGCC CGGCGAAAAC GCCCGAGGGC TACGCCTCCG GCGCGTTCGG CCCGACCACC GCGGGACGGA TGGACTCCTT CGTCGATCAG TTCCAGGCGG CCGGCGGCTC GATGGTGATG GTGGCGAAGG GCAATCGCGC GGTGGCGGTG CGCGAGGCCT GCAAGAAGCA CGGCGGGTTC TATCTCGGCT CGATCGGCGG CGCCGCGGCG AACTTGGCCG AGCACTGCAT CAAGAAGGTC GAGCTGGTGG AATATCCCGA GCTTGGCATG GAGGCGATCT GGCGGATCGA GGTGCAGGAC TTCCCCGCCT TCATCATCAT CGACGACAAG GGCAACGACT TCTTCAAGGA GTTAAATCTG GGCTGA
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Protein sequence | MNAPTPIPSA ATPVPPYKHT PLFPLGKDET PYRKITSEGV RVETVLGRAM LVVEREALRA LSEAAFGDIN HYLRPQHLQQ LRNILDDNDA SPNDKFVALD FLKNANIAAG GVLPMCQDTG TAIIMGKKGF NVITDGSDEA ALSEGARDAY LRRNLRYSQV APLSMYEEKN TANNMPAQCE IYAEGDDAYK FMFMAKGGGS ANKSFLFQAT PSVLTKDRLL AFLKEKVLTL GTAACPPYHL AIVIGGTSAE LCMKTVKLAS AKYLDALPTH GSENGNGFRD LEMEQEILKM TQSLGVGAQF GGKYFCHDVR VIRLPRHGAS LPIGLGVSCS ADRQVLGKIT KDGVYLEELE HNPARFLPEV EQALGGEVVQ IDLNQPMQEI LATLSKYPTK TRLSLSGTMI VARDSAHAKL RERLDNGEPL PDYFKNHPVY YAGPAKTPEG YASGAFGPTT AGRMDSFVDQ FQAAGGSMVM VAKGNRAVAV REACKKHGGF YLGSIGGAAA NLAEHCIKKV ELVEYPELGM EAIWRIEVQD FPAFIIIDDK GNDFFKELNL G
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