| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1525 |
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| Symbol | |
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| ID | 3971961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1662887 |
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| End bp | 1663444 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637924640 |
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| Product | deoxycytidine triphosphate deaminase |
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| Protein accession | YP_531406 |
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| Protein GI | 90423036 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0717] Deoxycytidine deaminase |
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| TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.409036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.538496 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGATTCTAA CCGATCGAGA AATCCAGATA GGGCTCACTC GAAAGCAGAT CGTCATCGAT
CCAGCGCCTC AGTCCGACGC ATATAGCTCG ACGAGCGTGG ACCTGACTCT GGATCCGGTC
CTCACGCTCT TCGATGTCGG AGAAGAGTTT GTCAGGAAGG TCATCGACCC TACGCACGCA
AAGTACAATA TGGATCGTGC GCTGAAAGAA CTAACCAAAT CTCATACTAT TGATTCAGCG
ACCGGCTTTG ATCTCGTTCC CCGCCATCTC ATCCTTGGCT GGACGCGGGA GTATGTTCGT
CTACCAATCG ACGCCCGTTT GGCCGCAAGG GTAGAGGGAA AAAGCTCTCT GGCAAGGATG
GGTATCGGCG TTCATATTAC TGCCCCAACG ATTCATGCCG GATTCGAAGG GCAAATAAGG
CTGGAGATTC TGAACCACGG GCATCTTCCC ATTACCCTTC GGCCAGACAT GAAGATTTGC
CAACTGATTT TTGAACAAAC CCTGGGCACG CCGCAGAAGG GCTATCAAGG TCAGTTCTCC
GGACAAGCCG CTAGGTAG
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| Protein sequence | MILTDREIQI GLTRKQIVID PAPQSDAYSS TSVDLTLDPV LTLFDVGEEF VRKVIDPTHA
KYNMDRALKE LTKSHTIDSA TGFDLVPRHL ILGWTREYVR LPIDARLAAR VEGKSSLARM
GIGVHITAPT IHAGFEGQIR LEILNHGHLP ITLRPDMKIC QLIFEQTLGT PQKGYQGQFS
GQAAR
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