Gene RPC_1522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1522 
SymbolflhB 
ID3971958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1657538 
End bp1658614 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content64% 
IMG OID637924637 
Productflagellar biosynthesis protein FlhB 
Protein accessionYP_531403 
Protein GI90423033 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1377] Flagellar biosynthesis pathway, component FlhB 
TIGRFAM ID[TIGR00328] flagellar biosynthetic protein FlhB 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.23127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.258787 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACG ACGATTCCTC GGAAAAAACC CAAGACCCTA CGCAAAAGCG TCTCGACGAC 
GCTCTCGAAC GCGGCGACGT CGCCAAGAGC CAGGAGGTCA ACACCTGGTT CATGATCGCC
GGCGCCACGC TGGTGCTGTC GTCGTTCTCC GGATCGGTCG GCAGCGGGCT GCAGAACCCG
CTGCGCAACC TGATCGAGAA CTCCTGGATG ATCCGCACCG ACGGCGCCGG GCTGATGGCG
CTGACGCAGA GCCTGCTGTA CGCCGCGATC GCCGCGATGG GGGTGCCGTT CCTGATGCTG
ATCATCGCGG CGCTGGCCGG CAATATGTTG CAGCACCGGC TGGTGTTTTC GGCGGAGGGG
CTGAAGCCGA AATTCAGCAA GATCTCGCCG TTGGCCGGCG CCAAGCGGCT GTTCGGCAAG
CAGGCGGCGG CGAATTTCCT CAAGGGGCTG TTCAAGGTGA TCGCGCTCGG CGCGGTGATG
GTGGCGATCC TGTGGCCGGA GCGCTACCGG CTCGACGCCA TGATCCGGCT CGACATCGGC
GCCATCATGG GCCTCACCAT CGCGTTGACG CTGAAGCTGA TGGCCGCGGT GGTGGCGATG
CTGGCGGCGG TGGCGATCGC CGATTTCTTC TTTCAGTACC GCACCTGGTA CGAAAAGCAG
AAGATGTCGC TGCAGGAGGT CAAGGAAGAG CACAAGCAGT CGGAAGGCGA CCCCCATATC
AAGGGCCGGA TCCGGCAGAT CCGCCATCAG CGGATGCGCA AGCGGATGAT GGCGGCGGTG
CCGCAGGCCT CGGTGGTGAT CACCAACCCG ACCCACTATT CGGTGGCGTT GTCCTACGAA
AACGGCATGT CGGCGCCGAT CTGCGTCGCC AAGGGCGTCG ACTCGATCGC GTTCAAGATC
CGCGAAGTCG CCAAGGCGCA CGACGTGCCG ATCATCGAAA ACGTGCCGCT GGCGCGCGCG
CTGTACGCCA CGGTGAAGAT CGACGAAGAG ATCCCGGTCG AGCACTATCA TGCGGTGGCG
GAGATCATCG GCTATGTGAT GGGCCTGAAG CGCGGCTTGT CGGGCCGGCG GCGGTGA
 
Protein sequence
MSDDDSSEKT QDPTQKRLDD ALERGDVAKS QEVNTWFMIA GATLVLSSFS GSVGSGLQNP 
LRNLIENSWM IRTDGAGLMA LTQSLLYAAI AAMGVPFLML IIAALAGNML QHRLVFSAEG
LKPKFSKISP LAGAKRLFGK QAAANFLKGL FKVIALGAVM VAILWPERYR LDAMIRLDIG
AIMGLTIALT LKLMAAVVAM LAAVAIADFF FQYRTWYEKQ KMSLQEVKEE HKQSEGDPHI
KGRIRQIRHQ RMRKRMMAAV PQASVVITNP THYSVALSYE NGMSAPICVA KGVDSIAFKI
REVAKAHDVP IIENVPLARA LYATVKIDEE IPVEHYHAVA EIIGYVMGLK RGLSGRRR