| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1521 |
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| Symbol | fliR |
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| ID | 3971957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1656757 |
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| End bp | 1657527 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637924636 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_531402 |
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| Protein GI | 90423032 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0686482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.256495 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCATCG ATATTTCATT CCTGCCCGCG CTCGCCGCCG CCTTCATGCT GGTGTTTGCC
AGGATCGCCG CGATGGTGAT GCTGATGCCG GGGTTCGGCG AAACCAACAT CCCGGTGCGC
ATCAAGCTCG CCATCGCGCT GGTGTTGACG CTGGTGATCC TGCCGCTGCA CCGCTCCGAC
TACCAGGTCG ACATGACGTC GCTGACGCCG CTGATCGTCT TGATGCTGCA CGAGATCGTC
ATCGGCATCG TGCTGGGGGC CACTGCGCGG GTGACGCTGT CGGCGCTGCA GGTCGCGGGC
TCGGTGATCG CCCAGCAACT CGGGCTCGGC TTCGTCACCT CGGTCGATCC GACCCAGGGC
CAGCAGGGCG CGGTGATCGG CAATTTCCTG ACGCTGCTCG GGCTGACGCT CTTGTTCGCC
ACCGACACCC ATCATCTGGT GATCGCCGCG CTCAACGAGA GCTACCGGAT CTTTTCGCCC
GGCGAGTTCA TGTCGAGCGG CGACGTCGCG TCATTGGCCA CCCGGGCGTT CGCCGCCGCC
TTCAAGATCG GCATGCAGCT GTCGGCGCCG TTCCTGGTGT TCGGCCTGGT GTTCAACATC
GGGCTCGGCG TGTTGGCGCG GCTGATGCCG CAGATGCAGG TGTATTTCGT CGGCGTGCCG
CTGTCGATCT TCGCCGGCTT CTTGATCTTC GGCGCCGTGC TGGCGACGAT GATGCACACC
TTCCTGGACT ACTTCATCGC GGTCATGCAT CAGCTGATCC CCGGACTGTG A
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| Protein sequence | MRIDISFLPA LAAAFMLVFA RIAAMVMLMP GFGETNIPVR IKLAIALVLT LVILPLHRSD
YQVDMTSLTP LIVLMLHEIV IGIVLGATAR VTLSALQVAG SVIAQQLGLG FVTSVDPTQG
QQGAVIGNFL TLLGLTLLFA TDTHHLVIAA LNESYRIFSP GEFMSSGDVA SLATRAFAAA
FKIGMQLSAP FLVFGLVFNI GLGVLARLMP QMQVYFVGVP LSIFAGFLIF GAVLATMMHT
FLDYFIAVMH QLIPGL
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