Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1520 |
Symbol | fliQ |
ID | 3971956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1656402 |
End bp | 1656665 |
Gene Length | 264 bp |
Protein Length | 87 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637924635 |
Product | flagellar biosynthesis protein FliQ |
Protein accession | YP_531401 |
Protein GI | 90423031 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1987] Flagellar biosynthesis pathway, component FliQ |
TIGRFAM ID | [TIGR01402] flagellar biosynthetic protein FliQ |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00598342 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.364566 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGGCA TGGAAACCCT CGACGTCGCG CGCGACGCGA TCTGGACCAT CGTCATCGTG TCGTCGCCGC TGATGGTGGT CGGCCTGGTG GTCGGCGTGG CGGTGTCGCT GGTGCAGGCG CTGACCCAGA TCCAGGAACA GACCCTGGTT TTCGTGCCGA AAATCATCGC CATCTTCGTC ACCTTGATCT TGGCGCTGCC GTTCATGGCC GACGCGATGC ACAGCCACAT GATGCGGATT TCGTCGCGAA TCATGGGAGG CTAG
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Protein sequence | MTGMETLDVA RDAIWTIVIV SSPLMVVGLV VGVAVSLVQA LTQIQEQTLV FVPKIIAIFV TLILALPFMA DAMHSHMMRI SSRIMGG
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