Gene RPC_1516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1516 
Symbol 
ID3972164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1653417 
End bp1654520 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content73% 
IMG OID637924631 
Producthypothetical protein 
Protein accessionYP_531397 
Protein GI90423027 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0503822 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.882647 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTCGC CAGTTGTCTT CTTTTTCGCA TTCGTGGCCG TCCTGGCCCT GATCGGCGTC 
GCGGCCTGGT TGGTCCGCCG ATTCGCCGGC AGCCGGCTGG GGGCCAGCGC GAACCGGGGT
CGGATGCCGC GGCTGGCGGT GATCGATGCC GCGGCGGTCG ACGGCCGGCG GCGGCTGGTG
CTGGTGCGCC GGGACAATGT CGAACATCTG TTGATGATCG GCGGCCCGAC CGATCTGGTC
GTCGAACCCA ACATCGTGCG CGGCAATCTG ACCCGCGAGC AGATGCCGCA GCGTCCCGCG
GTCGGCACCG AGCCGCCGCC GCGGATTTCG CCGCTGGAAG CCGCCAATTG GGAGCCCGAC
CCCCAGGACC AGACCGAACC GCAACTGCCG GAGCCGCCGC AGCGCCCGGT GCGTCCGTCC
TACGCCGAAG AAGCGCGGCG GGTGCCGCCG CCGCTGGCCG AGCGTCGCGG CGGCAACGAT
CTGCTGGGCG GCCTGGAGCC GCTGAGCCGA CCTGAAGCGC TCCGCCCCGA GCCGCAACTT
CGCCCCGAGC CGCAACTCCG CCCCGAGCCG CAGCTGCGCA CCGAGCCGCA GCTCCGCCCG
GAGCCGGTGC TCCGTAGCGA ACCGATCAGC CGTGCCGAAC CGCGGCCCGA ACCGCGGCTG
GAGCCGACGC CGCAGCGTCC GCAGCGCGCC GAGCCGGCCA TGCCGCGGCC GATGCGCGAA
CCGGCGATGA AACTGCCGCG GGCGCCGGCA CCGGAACGTG CCGCGCCGCC GCCGCCGCCG
CCACTCGCTC CTGCAACGCC GCCGGCGCCG ACGCTGTCGG CCGCCGACCA GAACCTCGCC
GACATGGCGC AGCGGCTGGA AGCCGCGTTG CGCCGGCCGA TCGGCGAGCA TCGCGAAGCC
TCGCCGCCGG TGGCGCCGGA GCCGCCGCCG AGCCGGTCGC GCAGCGCGAG CGAAAGCTCG
AATTCGGGCC ATGGTCATAG CCAGGGCGAA CATGGCGAAC AGCCGCCGAT CACCCCGGCC
GGGCCGCCGT CGATGAAGAC CGGCTTCGAA AATCTGGAAG ACGAGATGGC GTCGCTGCTC
GGTCGTCCAA AGAACCCTTC GTGA
 
Protein sequence
MQSPVVFFFA FVAVLALIGV AAWLVRRFAG SRLGASANRG RMPRLAVIDA AAVDGRRRLV 
LVRRDNVEHL LMIGGPTDLV VEPNIVRGNL TREQMPQRPA VGTEPPPRIS PLEAANWEPD
PQDQTEPQLP EPPQRPVRPS YAEEARRVPP PLAERRGGND LLGGLEPLSR PEALRPEPQL
RPEPQLRPEP QLRTEPQLRP EPVLRSEPIS RAEPRPEPRL EPTPQRPQRA EPAMPRPMRE
PAMKLPRAPA PERAAPPPPP PLAPATPPAP TLSAADQNLA DMAQRLEAAL RRPIGEHREA
SPPVAPEPPP SRSRSASESS NSGHGHSQGE HGEQPPITPA GPPSMKTGFE NLEDEMASLL
GRPKNPS