Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1516 |
Symbol | |
ID | 3972164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 1653417 |
End bp | 1654520 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637924631 |
Product | hypothetical protein |
Protein accession | YP_531397 |
Protein GI | 90423027 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0503822 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.882647 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTCGC CAGTTGTCTT CTTTTTCGCA TTCGTGGCCG TCCTGGCCCT GATCGGCGTC GCGGCCTGGT TGGTCCGCCG ATTCGCCGGC AGCCGGCTGG GGGCCAGCGC GAACCGGGGT CGGATGCCGC GGCTGGCGGT GATCGATGCC GCGGCGGTCG ACGGCCGGCG GCGGCTGGTG CTGGTGCGCC GGGACAATGT CGAACATCTG TTGATGATCG GCGGCCCGAC CGATCTGGTC GTCGAACCCA ACATCGTGCG CGGCAATCTG ACCCGCGAGC AGATGCCGCA GCGTCCCGCG GTCGGCACCG AGCCGCCGCC GCGGATTTCG CCGCTGGAAG CCGCCAATTG GGAGCCCGAC CCCCAGGACC AGACCGAACC GCAACTGCCG GAGCCGCCGC AGCGCCCGGT GCGTCCGTCC TACGCCGAAG AAGCGCGGCG GGTGCCGCCG CCGCTGGCCG AGCGTCGCGG CGGCAACGAT CTGCTGGGCG GCCTGGAGCC GCTGAGCCGA CCTGAAGCGC TCCGCCCCGA GCCGCAACTT CGCCCCGAGC CGCAACTCCG CCCCGAGCCG CAGCTGCGCA CCGAGCCGCA GCTCCGCCCG GAGCCGGTGC TCCGTAGCGA ACCGATCAGC CGTGCCGAAC CGCGGCCCGA ACCGCGGCTG GAGCCGACGC CGCAGCGTCC GCAGCGCGCC GAGCCGGCCA TGCCGCGGCC GATGCGCGAA CCGGCGATGA AACTGCCGCG GGCGCCGGCA CCGGAACGTG CCGCGCCGCC GCCGCCGCCG CCACTCGCTC CTGCAACGCC GCCGGCGCCG ACGCTGTCGG CCGCCGACCA GAACCTCGCC GACATGGCGC AGCGGCTGGA AGCCGCGTTG CGCCGGCCGA TCGGCGAGCA TCGCGAAGCC TCGCCGCCGG TGGCGCCGGA GCCGCCGCCG AGCCGGTCGC GCAGCGCGAG CGAAAGCTCG AATTCGGGCC ATGGTCATAG CCAGGGCGAA CATGGCGAAC AGCCGCCGAT CACCCCGGCC GGGCCGCCGT CGATGAAGAC CGGCTTCGAA AATCTGGAAG ACGAGATGGC GTCGCTGCTC GGTCGTCCAA AGAACCCTTC GTGA
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Protein sequence | MQSPVVFFFA FVAVLALIGV AAWLVRRFAG SRLGASANRG RMPRLAVIDA AAVDGRRRLV LVRRDNVEHL LMIGGPTDLV VEPNIVRGNL TREQMPQRPA VGTEPPPRIS PLEAANWEPD PQDQTEPQLP EPPQRPVRPS YAEEARRVPP PLAERRGGND LLGGLEPLSR PEALRPEPQL RPEPQLRPEP QLRTEPQLRP EPVLRSEPIS RAEPRPEPRL EPTPQRPQRA EPAMPRPMRE PAMKLPRAPA PERAAPPPPP PLAPATPPAP TLSAADQNLA DMAQRLEAAL RRPIGEHREA SPPVAPEPPP SRSRSASESS NSGHGHSQGE HGEQPPITPA GPPSMKTGFE NLEDEMASLL GRPKNPS
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