Gene RPC_1503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1503 
Symbol 
ID3972151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1639494 
End bp1640432 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content62% 
IMG OID637924618 
ProductNmrA-like 
Protein accessionYP_531384 
Protein GI90423014 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.245371 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATTG CTGTTGTCGG CGCAACCGGA CGGATCGGTG CCCAGCTCAC ACGGAGATTG 
CTGAGCGCTG GTCATCAGGT GAAGGCGCTG TCGCGGGGCG GCGCAGCGCT CGACGCGCTG
GTCAAGATCG GCGCGGAGCC GTTTCTGGGA AGCTTCGACA CCGGCGCCGG AGACCTCGCT
ACGTTTTTTC AGGATGCCGA TGCCGCGTTC CTGATGGTGA AGACCGATTG GAACAACATT
CACGGGCACT ATCCGGTCGT TGCCCAACGC TTTGTCGACG CGCTTGGTAG CTCTCCAGTC
AGGCTCGCGG TCAACTTGTC GGCGATCGGG TCGGACGTGA AGGGCGACAC CGGGCATTTT
GAAGGCTTCC ACCACCTGGA CCAAACGCTG AACCAACTCA GCAATCTCGA TCTGGTGCAT
CTGCGTGCGT CCTGGTTCAT GGAGAACACG CTGGCCTGGA CGGCGGCGGT TGCAAAGCAC
TGCGGAATCG GTTGGTCGCT CGACCCCGAT CTGAAGACTC CTTGGGTCGC CACGGATGAC
ATCGCCGATC TGGCGGCCAA GGAATTGACC CATCCGACGG GCGAACACCG CGTCATCCGC
GAGGTCGGTT CGGAAGATCT CACGATGCCT GAGCTGGCCG CGATGATCGG CCGAGAGATC
GGCCGGCCAG TGGCGTATCG TTTCGTCGAC AGAACGCGGA AGGATATTGA AGCCGAGTAT
CTCAAGCGCT TTGGCACGCC GGAAAGATGG CTCGACGACA GCTTGACGGC CGCCGCGCTC
AACGATGGTC GTGTCCGATT CCACGGTCGC CGCAGCCCGC TGCCCACCAC GATGGAAATG
TTCATCAGAG ACGTTTGGAA GCCGCGTTAT CTGCAGGCGG TTGCCGACGA CCACGAAACC
GAGACGTTTC CGACCTGGAG CTCCAGGGCC GAACGCTGA
 
Protein sequence
MRIAVVGATG RIGAQLTRRL LSAGHQVKAL SRGGAALDAL VKIGAEPFLG SFDTGAGDLA 
TFFQDADAAF LMVKTDWNNI HGHYPVVAQR FVDALGSSPV RLAVNLSAIG SDVKGDTGHF
EGFHHLDQTL NQLSNLDLVH LRASWFMENT LAWTAAVAKH CGIGWSLDPD LKTPWVATDD
IADLAAKELT HPTGEHRVIR EVGSEDLTMP ELAAMIGREI GRPVAYRFVD RTRKDIEAEY
LKRFGTPERW LDDSLTAAAL NDGRVRFHGR RSPLPTTMEM FIRDVWKPRY LQAVADDHET
ETFPTWSSRA ER