Gene RPC_1499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1499 
Symbol 
ID3972283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1636971 
End bp1637387 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content60% 
IMG OID637924614 
ProductTraR/DksA family transcriptional regulator 
Protein accessionYP_531380 
Protein GI90423010 
COG category[T] Signal transduction mechanisms 
COG ID[COG1734] DnaK suppressor protein 
TIGRFAM ID[TIGR02420] RNA polymerase-binding protein DksA 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0747562 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCTTGG AAAAGTTGAA AAGCTACCGC CCCTCCGAAA AAGAGCCTTT CATGAACGAT 
CGGCAGCGCG ATTACTTTCG CGCAAAGCTG CTAGCCTGGA AGGACGAGAT CCTGCGGGAA
TCCAGGATCA CCCTGCAAAC ACTCCAAGAA GAAAACGTCA ATCACCCCGA TCTGGCGGAC
CGTGCCGCCT CGGAAACCGA CCGCGCCATC GAACTGCGCG CCCGCGACCG CCAGCGCAAA
CTGATCTCCA AGATCGACGC CGCGCTGCAG CGCATCGAAG ACAACACCTA CGGCTACTGC
GAAGAAACCG GCGAGCCGAT CTCGCTGAAG CGGCTCGAGG CGCGCCCGAT CGCCACGCTC
TCGGTGGAAG CGCAGGAACG CCACGAAAAG CGCGAGAAGG TGTATCGCGA CGAGTAG
 
Protein sequence
MALEKLKSYR PSEKEPFMND RQRDYFRAKL LAWKDEILRE SRITLQTLQE ENVNHPDLAD 
RAASETDRAI ELRARDRQRK LISKIDAALQ RIEDNTYGYC EETGEPISLK RLEARPIATL
SVEAQERHEK REKVYRDE