Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1480 |
Symbol | |
ID | 3973841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1615504 |
End bp | 1616004 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637924595 |
Product | methionine sulfoxide reductase B |
Protein accession | YP_531361 |
Protein GI | 90422991 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.538813 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.628566 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGACC GGCGTTTACT GCTCGCTTCG GTGGCGAGCC TGGCCGCGCT GCTCGGGTTC CGCTGGCTGC GGCCGTCGGA GGCGCGGGCC GCTGAGAAAT TCGAGATCGA GAAAACCCCG GAGCAGTGGA AGCAGCAGCT GACCCCGATG CAGTACCATA TCCTGCGCGA GGAGGGCACC GAACGGCCCG GCTCCAGCCC GCTGTTGAAG GAACACCGCA AGGGTACCTT CGCCTGCGCC GGCTGCGACC TGCCGCTATT TGCCTCCGAA ACCAAGTTCG AAAGCGGCAC CGGCTGGCCG AGCTTCTATC AGCCGCTGCC GAACGCGGTC GGCGAGCGCA AGGATTCCAC GCTGGGCATG AGCCGCACCG AGATCCATTG CCGGCGCTGC GGCGGCCATC TCGGCCATGT GTTCGACGAC GGCCCGAAGC CGACCGGCTT ACGCTACTGC ATGGACGGCT TCGCGCTGGT GTTTCACCCG GCCACGGCGG GGGCGAGCTG A
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Protein sequence | MMDRRLLLAS VASLAALLGF RWLRPSEARA AEKFEIEKTP EQWKQQLTPM QYHILREEGT ERPGSSPLLK EHRKGTFACA GCDLPLFASE TKFESGTGWP SFYQPLPNAV GERKDSTLGM SRTEIHCRRC GGHLGHVFDD GPKPTGLRYC MDGFALVFHP ATAGAS
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