Gene RPC_1480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1480 
Symbol 
ID3973841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1615504 
End bp1616004 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content67% 
IMG OID637924595 
Productmethionine sulfoxide reductase B 
Protein accessionYP_531361 
Protein GI90422991 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.538813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.628566 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGACC GGCGTTTACT GCTCGCTTCG GTGGCGAGCC TGGCCGCGCT GCTCGGGTTC 
CGCTGGCTGC GGCCGTCGGA GGCGCGGGCC GCTGAGAAAT TCGAGATCGA GAAAACCCCG
GAGCAGTGGA AGCAGCAGCT GACCCCGATG CAGTACCATA TCCTGCGCGA GGAGGGCACC
GAACGGCCCG GCTCCAGCCC GCTGTTGAAG GAACACCGCA AGGGTACCTT CGCCTGCGCC
GGCTGCGACC TGCCGCTATT TGCCTCCGAA ACCAAGTTCG AAAGCGGCAC CGGCTGGCCG
AGCTTCTATC AGCCGCTGCC GAACGCGGTC GGCGAGCGCA AGGATTCCAC GCTGGGCATG
AGCCGCACCG AGATCCATTG CCGGCGCTGC GGCGGCCATC TCGGCCATGT GTTCGACGAC
GGCCCGAAGC CGACCGGCTT ACGCTACTGC ATGGACGGCT TCGCGCTGGT GTTTCACCCG
GCCACGGCGG GGGCGAGCTG A
 
Protein sequence
MMDRRLLLAS VASLAALLGF RWLRPSEARA AEKFEIEKTP EQWKQQLTPM QYHILREEGT 
ERPGSSPLLK EHRKGTFACA GCDLPLFASE TKFESGTGWP SFYQPLPNAV GERKDSTLGM
SRTEIHCRRC GGHLGHVFDD GPKPTGLRYC MDGFALVFHP ATAGAS