Gene RPC_1478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1478 
Symbol 
ID3973839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1613126 
End bp1613665 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content70% 
IMG OID637924593 
Productputative phosphohistidine phosphatase, SixA 
Protein accessionYP_531359 
Protein GI90422989 
COG category[T] Signal transduction mechanisms 
COG ID[COG2062] Phosphohistidine phosphatase SixA 
TIGRFAM ID[TIGR00249] phosphohistidine phosphatase SixA 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.924383 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.612523 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGAT TGATCCTGCT GCGTCACGCC AAGACCGAGT CCGACGCGCC AAGCGGCAAG 
GACCACGACC GCCGGCTCGA CGACCGCGGC CGCGAGGACG CCGCCGCGAT CGGCGGCTGG
CTGATCGGCC AGCAGCTGCG GCCCGAACTG GTGCTGGTGT CGAGCGCGGT GCGGGCGCAG
CAGACCTGGG CGATCGTCGG CGACCAGATC CCGGCCGACG CGCCGCAGCC CAACGTGGCG
CATCTCGCCG AGCTCTATTC CGCGACCCCG GCGACGATGC TCGGCATCCT CCGCGAGGTG
CCCGGCCATC CGCAGCTGAT CCTGCTGATC GGGCATAATC CAGGGCTGCA CGAACTGGCG
CTGGGCTTGA GCTGCAGCAA AGGCGGCACC GAGCACAAGC CGCTGCCCGG CAACATGCCG
ACCGCGGCGG TCGCGGTGAT CGATTTTGCC ATCAAGCACT GGGGCGACGC CAGCTTCGGC
GGCGGCCGGC TGACGCAGTA CATGACCCCG AAGCTGTTGA AGGCCCCGCA CGGCCATTGA
 
Protein sequence
MRRLILLRHA KTESDAPSGK DHDRRLDDRG REDAAAIGGW LIGQQLRPEL VLVSSAVRAQ 
QTWAIVGDQI PADAPQPNVA HLAELYSATP ATMLGILREV PGHPQLILLI GHNPGLHELA
LGLSCSKGGT EHKPLPGNMP TAAVAVIDFA IKHWGDASFG GGRLTQYMTP KLLKAPHGH