Gene RPC_1470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1470 
Symbol 
ID3973831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1607049 
End bp1607555 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content62% 
IMG OID637924585 
Producthypothetical protein 
Protein accessionYP_531351 
Protein GI90422981 
COG category[S] Function unknown 
COG ID[COG3685] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0321654 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.306321 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACTTT TTACCAAAGA CATCAAGACC ATGGACGATC TGTTCATCCA CCAGTTGCAG 
GACATCTATT ACGCCGAGAA GCAGCTCGTG AAGGCGATCC CGAAAATGGC CGACAAGGCC
ACCGACGCGC AGTTGAAGCA GGGTTTCCTG ACCCATCTCG ACGAGACCAA GGTGCACGTG
CAGCGGCTGG AACAGGTGTT CCAGATGCAC GGCGTCGCCG CCAAGGCGGT GGATTGTCCG
GCGATCGACG GCATCATCGA AGAGGCCGAT GAAGTGGCCG GCGAGGTCGA CGACAAGGCG
GTGCTCGACG CCGCCCTGAT CAACGCCGCG CAGGCCGTCG AACACTACGA AATGACCCGC
TATGGCAGCC TGGTGGCGTG GGCCAAGCAG CTCGGCCGCA ACGATTGCGC CGCGGTGCTG
CAGAAGACCC TGGACGAGGA AAAGGCCACC GACAAGAAGC TGACCAGCTT GGCCGAGAGC
CGGATCAACC TGCGCGCCGC CGGCTGA
 
Protein sequence
MGLFTKDIKT MDDLFIHQLQ DIYYAEKQLV KAIPKMADKA TDAQLKQGFL THLDETKVHV 
QRLEQVFQMH GVAAKAVDCP AIDGIIEEAD EVAGEVDDKA VLDAALINAA QAVEHYEMTR
YGSLVAWAKQ LGRNDCAAVL QKTLDEEKAT DKKLTSLAES RINLRAAG