Gene RPC_1467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1467 
Symbol 
ID3973828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1602074 
End bp1603168 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content69% 
IMG OID637924582 
Productcobalamin B12-binding 
Protein accessionYP_531348 
Protein GI90422978 
COG category[R] General function prediction only 
COG ID[COG5012] Predicted cobalamin binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.225745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCTT TACTGAAGAC GCTGAGTCCG GCCGCGCTGC GCCAGTTCGA AACCCTGCAA 
TTCGACGCCG CCAGTTCCGT CACCGAACGG TTCTTCCCGA GCTGGCGCCG TCTGCCCGAG
CAATTCCAGC GCCAGGACGA GTGCCGCGAA TATCTGATCC ATCACCTGGA GTTCCTGAAG
TCGGCGCTGC AGTTCGGCGC GTTGGCGCCG ATGACGGAAT ATCTGCGCTG GCTCGACAGC
GTCCTCGCCG CGCGCAACGT GCCGCCGCAC AGCCTCGAGC AATCGCTGCG CTGGCTGGCG
GAGTATTTTG CCGCGCGCAT GGCGGGCGCC GACGGCGACG TCGTCCATGC CGCGCTGCTG
GCCGCCCGCG ACGAATTCGT CGCCGAGGCC GGCCGCGCCG ATCCTCCGAC GCCGCCGCAG
CGGACCGCGG AGGCCGCGGA ATTCCAGGCC GCGCTGCTCG GCGGCGATCA GCGCGCCGCG
CTCGCCGTCG TCACCCGCTG CCTCGACCAA GGCCGCAGCT TGACCGAAGT CGAACTCGAG
GTGATCCAGC CGGCGCTGTA CGGCATCGGC GAGGGCTGGC AGGCCAACGA GGTCAGCGTC
GCGCAGGAAC ACCTCGCCAC CGCGATCGTG CATGCGATCA TGACCATGGC GCTGCTGCGC
GCCAAGCCGC CGGCGTCGAA CGGCAAGCGC GTGCTGCTGG CCGGCGTCGC CGGCAATCAG
CACAGCGTCG GGCTGCGCAT GGTTGCGGAC TCGTTCCAGC TCGCCGGCTG GGAGGTGCAG
TATCTCGGCG CCGACGTGCC GACGCCGTCT TTGGTGCAGC AGATCGAGGC GTGGTGTCCG
CATATCGTCG GGCTCGCGGT GTCGTTTGCC CAGCAGCTGG CCGCGGTCAA GGATGCTATC
GTACGAATGA ATCAGCGTTT CGGAGCCGCC CGGCCGCCGG TGCTGATCGG CGGGCTGGCG
ATCAATCATT TCGGCTGGCT GGCGCGCATG GTCGGGGCCG ATGGTTGCGC CGCCGACGCC
CAGGCGGCGG TCGCGGAGGC GGAGCGCCTG CTGAATGAAA AGGACAACCG GTGTCGTGGA
TCGCGCCCGA ACTGA
 
Protein sequence
MSALLKTLSP AALRQFETLQ FDAASSVTER FFPSWRRLPE QFQRQDECRE YLIHHLEFLK 
SALQFGALAP MTEYLRWLDS VLAARNVPPH SLEQSLRWLA EYFAARMAGA DGDVVHAALL
AARDEFVAEA GRADPPTPPQ RTAEAAEFQA ALLGGDQRAA LAVVTRCLDQ GRSLTEVELE
VIQPALYGIG EGWQANEVSV AQEHLATAIV HAIMTMALLR AKPPASNGKR VLLAGVAGNQ
HSVGLRMVAD SFQLAGWEVQ YLGADVPTPS LVQQIEAWCP HIVGLAVSFA QQLAAVKDAI
VRMNQRFGAA RPPVLIGGLA INHFGWLARM VGADGCAADA QAAVAEAERL LNEKDNRCRG
SRPN