Gene RPC_1465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1465 
Symbol 
ID3973826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1600257 
End bp1600901 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content71% 
IMG OID637924580 
Producthypothetical protein 
Protein accessionYP_531346 
Protein GI90422976 
COG category[S] Function unknown 
COG ID[COG4731] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0300883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGACGT TTGGTTTTGG GGCTCGGCGG CTGGCTGCGG TCGTCGCCGC GGTGGCGGTG 
CTGGTCGGCT CCGCCATGGC GGCCGGCGCG GCGGAGCCCA CCGCGGCGGG GCTGTGGCAA
CGCAGCGAGG ACGGCAAGCC GGTGGTTTGG CTGTTGATGC TGGACCGCGG CAACGGGATG
TATGAGGGCG TGGTGGCCAA GACCTTCCCG AAGCCCGGCG TCGACCCCAA CGCGGTCTGC
GACGAATGCG AGGACGACCG CAAGAACGCG CCGGTGCTCG GCATCTCGCT GATCCGCGAC
ATGAAGCGCA AGGGGCTGGA ATATCTCGGC GGCAACATCC TCGACCCGCG CAACGGCGAC
ATCTGGAAGG CGCAGCTCAA GGTCAGCCCG GACGGCCAGG CGCTGACGCT GCGCGGCTAT
CTGATGACGC CGATGCTCGG CAAGGACGAA ACCTGGCAGC GGCTGCCGGA CACCGCCTTG
GCGCAGCTCG ATCCGGCGAT CGTCGCCAAA TTCCTGCCGG CCCAGGCGGC GCAGGCCACG
CCGGCGGCGA CCACCGCGGC GGCCGGCGCG GCTGGTGCGG CCGGCGCGGC CAAGCCATCG
GTGGCGCCGA AGGCCAAGAC GACTCCGGCG CCCGCGGCGA AGTAG
 
Protein sequence
MWTFGFGARR LAAVVAAVAV LVGSAMAAGA AEPTAAGLWQ RSEDGKPVVW LLMLDRGNGM 
YEGVVAKTFP KPGVDPNAVC DECEDDRKNA PVLGISLIRD MKRKGLEYLG GNILDPRNGD
IWKAQLKVSP DGQALTLRGY LMTPMLGKDE TWQRLPDTAL AQLDPAIVAK FLPAQAAQAT
PAATTAAAGA AGAAGAAKPS VAPKAKTTPA PAAK