| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1458 |
|---|
| Symbol | |
|---|
| ID | 3973436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 1589849 |
|---|
| End bp | 1590877 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637924573 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_531339 |
|---|
| Protein GI | 90422969 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0492] Thioredoxin reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAG CGATCAAAAC CGATGTCCTG ATAGTTGGCG CGGGCCCCTG CGGACTGTTC
GCCGTGTTCG AGCTGGGCCT GCTCGACGTC AAGGTGCATC TGGTCGATAT TCTCGACAAG
ATCGGCGGGC AATGCGCCGA GCTGTATCCG GAAAAGCCGA TCTACGACAT TCCCGGCATC
CCGATGATCA CCGGCCACGG CCTCACCGAA TCCCTGCTCG AGCAGATCAA GCCGTTCAAC
CCGACCTTCC ATCTCAACGA GATGATCGAG ACCGTGGAGA AGATCGGCGA CCCCGGCTTC
CGCGTCACCA CCGACGCCGG CAAGGTGTTC GAATGCAAGG TGCTGGTAGT GGCCGCCGGC
GGCGGCTCGT TCCAGCCGAA GCGCCCGCCG GTGCCGGGCA TCGAGGCTTA CGAAGGCGGC
TCGGTGCACT ACGCGGTGCG CAAGATGGAA GAATTCCGCG ACAAGGATCT GATGATCGTC
GGCGGCGGCG ATAGCGCGCT CGACTGGGTG CTCAACCTGC ACCCGCTCGC CAAGCGCATC
ACGCTGGTGC ATCGCCGCGA CGATTTCCGT GCCGCGCCGC ATAGCGTCGA GCAGATGCGC
GCGCTGGTCG CCTCCGGGCA GATGGATCTG CTGATCGGCC AGGTCACCGC GCTGGACGGC
GAGGGCAAGG AGCTGTCCGC CGCCACCGTG AAGGGCAATG ACGGCACCAC CACCAAGGTC
GCCTGCAATG CGATGCTGCC GTTCTTCGGG CTCACCATGA AGCTCGGCCC GGTGGCGAAT
TGGGGCCTGC ATCTGGAGAA CAACCTGGTG CCGGTCGACA CCGGCACCTT CGAAACCAAC
GTGCCCGGCA TCTTCGCGAT CGGCGACATC AACACCTATC CGGGCAAGTT GAAGCTGATC
TTGAGCGGCT TCCACGAGGG CGCGCTGATG GCGCAGAAGG CGGTCAAATA CGTCTATCCG
GACAAGCGCG TGGTGTTTCA GTACACCACG TCGTCGTCCA GCCTGCAGAA GAAGCTCGGC
GTCAACTAA
|
|---|
| Protein sequence | MSEAIKTDVL IVGAGPCGLF AVFELGLLDV KVHLVDILDK IGGQCAELYP EKPIYDIPGI
PMITGHGLTE SLLEQIKPFN PTFHLNEMIE TVEKIGDPGF RVTTDAGKVF ECKVLVVAAG
GGSFQPKRPP VPGIEAYEGG SVHYAVRKME EFRDKDLMIV GGGDSALDWV LNLHPLAKRI
TLVHRRDDFR AAPHSVEQMR ALVASGQMDL LIGQVTALDG EGKELSAATV KGNDGTTTKV
ACNAMLPFFG LTMKLGPVAN WGLHLENNLV PVDTGTFETN VPGIFAIGDI NTYPGKLKLI
LSGFHEGALM AQKAVKYVYP DKRVVFQYTT SSSSLQKKLG VN
|
|---|
| |