Gene RPC_1440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1440 
Symbol 
ID3973708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1567985 
End bp1568437 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content61% 
IMG OID637924555 
Productcytochrome c, class II 
Protein accessionYP_531321 
Protein GI90422951 
COG category[C] Energy production and conversion 
COG ID[COG3909] Cytochrome c556 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.675106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACGAA CCGCCATCGT GATCGGGAGC TTGGTCCTCG GCGCCAGCGT GGTCGTCGCG 
CAGCAGGATC TGGTCAACCA GACCCAGATG CTGATGAAAG GCAACGGCAA GAATCTCGCC
ACCGTGCTGG CGCCGATCGC CAAGGGTGAG AAGCCCTACG ATCAAGCCGC GGTCAATGCG
GCGCTGGCGC AGTTCGAAGA CACCGCCAAG AAACTGCCGA CGCTGTTTCC CGCCAGCGTC
AAGGGCCTGA AGCCGGCCGA CAGCGATTAT TCGTCGTCGC CGAAGATCTG GGACAGCCGC
GCCGATTTCG ACGCCCATAT CGCCAGCTTC ACCAAGGCGG TCGCCGACGC CAAGGCCAAG
ATCAAGGATG TCGACACGCT GAAGGTCTCG GTTCAAGCGA TCGGCAAGGA ATGCAGCGGC
TGCCACGAAA CGTTCCGGCT GAAGAACACT TAA
 
Protein sequence
MLRTAIVIGS LVLGASVVVA QQDLVNQTQM LMKGNGKNLA TVLAPIAKGE KPYDQAAVNA 
ALAQFEDTAK KLPTLFPASV KGLKPADSDY SSSPKIWDSR ADFDAHIASF TKAVADAKAK
IKDVDTLKVS VQAIGKECSG CHETFRLKNT