Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1439 |
Symbol | |
ID | 3973707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1565466 |
End bp | 1567772 |
Gene Length | 2307 bp |
Protein Length | 768 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637924554 |
Product | carbon-monoxide dehydrogenase |
Protein accession | YP_531320 |
Protein GI | 90422950 |
COG category | [C] Energy production and conversion |
COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
TIGRFAM ID | [TIGR02416] carbon-monoxide dehydrogenase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCCCA TCAAATTCGG CGTCGGTCAC AGCGTGCGTC GCAAGGAGGA TGACGCGCTG CTTCGCGGCA AGGGCCGCTA CACCGACGAT CATGCGCCGC AGGCCACCGC TTATGCGCTG ATGCTGCGCT CGCCGCACGC CCACGCCACG TTCACCATCG ATGCCGACCG CGCCCGCACG CGCCCCGGCG TGCTGACCAT CCTGACCGGG GACGACGTCA AGGAACTCGG CGGTCTGCCC TGCTTGTTCA ATCTGCCGGA CAATCCGTTC AAGGCGCCGG ACTATCCGAT CCTGGCGCAA GGCGAGGTGC GCCACGTCGG CGACGCGGTG GCGTTCGTGG TGGCGGAAAC CTTGCCCCAG GCGCGCGACG CGCTCGAGGC GATCGAGGTG GAGTGGACGC CGCTGCCCGC CGTGGTCGGC GTGGTCAACG CGGTGAAGCC CGACGCCCCG CAGGTCTGGC CGCAATTTCC CGGCAACGTG CTGTTCGACG TGCCGATCGG CGACAAGGCC GCGACCGATG CGGTGTTCGC CAAGGCGCAT GCCATCGCCG AGATCAACAT CGTCAACCCG CGCATCATCA CCAACTACAT GGAAACCCGC GCGGTGGTCG CCGAATACGA TGCCAAGCGC GATCACCTGA CGCTGACCAT CGGCAGCCAG GGCAGCCATC GGCTGCGCGA CATTCTGTGC CAGACCGTGC TGAAGATCCC GGTCGATAAG ATGCGGGTGA TCTGCCCCGA CGTCGGCGGC GGCTTCGGCA CCAAGCTGTT TCCCTATCGC GAATACGCGC TGGCTGGCTT CGCTGCGCGA AAACTGCGCC GCAGCGTGAA ATGGGCCGCC GACCGCGCCG ATCATTTCGT CGGCGACGCG CAGGGCCGCG ACAACGTCAC CAAAGCCCGG ATGGCGCTTT CCGAGGACGG CAAGTTTCTC GCCATGGACG TCGACCTGAT CGGCGACATG GGCGCCTATC TGTCGACCTT CGGCCCCTAC GTTCCGTTCG GCGGCGCCGG GATGTTGCCT GGATTGTACG ACATCAAGAC GTTTCACTGC CGGGTGCGTA CGGTGTTCAG CAACACCGTG CCGGTCGACG CCTATCGCGG CGCCGGGCGC CCCGAGGCGG CCTATGTGAT CGAACGGCTG GTCGATGCCG CGGCGCGCAA GCTCGGGATG ACGCCGGACG CGATCCGCCG CAAGAATTTC ATCCCGCCCC GCGCGATGCC CTACACCACC GCCACCGGCA AGGTTTACGA TTCCGGCGAC TTCGCCGCGC ATCTGAAACG CGCGATGGAG GTCGGCAACT GGAAGGATTT CCCGCGGCGC GCCAAGGCTG CCAAGAAGCA AGGCCTGGTG CGCGGCATCG GGCTCGCGTC CTACGTCGAG GTCTGCGGCA CCATGGGCGA GGAGACCGCC AATCTGCGGC TCGACTCGAA TGGCGACGTC ACCATCCTGA TCGGCACCCA ATCCAGCGGC CAGGGCCATC AGACCGCCTA TGCGCAGATC GTCGCCGAAC AATTCGGCCT TCAGCCGGAG CGCGTCCACA TCGTGCAGGG CGACACCGAC CAGATCGCCA CCGGGCTCGG CACCGGCGGC TCGGCTTCGA TTCCGTCGGG CGGCGTCGCC GTCGAACGCG CCACCCGCAA ACTCGGCGCC AACCTGCGCG AGATCGCCGC CGACGCGCTG GAGGCCGGCG CCGCCGACCT CGAGATCAGC GACGGCACGG TGCGGGTCGC CGGCACCGAC CGCTCGATTT CGTTCGCCGA CCTCGCCAAA CGTCCGGGCG TCGATCCGGC CAAGCTCGCC ACCAGCGACA AGTTCTCCAG CGCCGACGGC ACCTATCCGA ACGGCACGCA TCTGGTCGAG GTCGAGATCG ATCCCGCCAC CGGCAAGATC GCCATCGTCA ACTACGTCAT CGTCGACGAT TTCGGCGTCA CGCTGAATCC GCTGCTGCTC GCCGGCCAAG TGCATGGCGG CACCATGCAG GGCATCGGCC AGGCGTTGAT GGAGCAGGCG GTGTACGATC CGCAGGACGG CCAGCTGATC ACCGGCAGCT TCATGGACTA CGCGCTGCCG CGCGCCGCCG ACGGCGCGCC GATCACGTTC GAAACCCACA ACGTGCCCTG CAAGACCAAT CCGCTCGGGG TCAAGGGCGC GGGCGAGGCC GGCGCGATCG GCTCATGCCC GGCGGTGGTC AACGCCATCA TCGACGGCCT GTGGCGGGAC TATCATATCG ATTCGATCGA CATGCCGGCG ACCCCGGAGC GGGTGTGGAT GGCGATCCGC GACCACGAAC GGCAGCATCG GCTGTAG
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Protein sequence | MAPIKFGVGH SVRRKEDDAL LRGKGRYTDD HAPQATAYAL MLRSPHAHAT FTIDADRART RPGVLTILTG DDVKELGGLP CLFNLPDNPF KAPDYPILAQ GEVRHVGDAV AFVVAETLPQ ARDALEAIEV EWTPLPAVVG VVNAVKPDAP QVWPQFPGNV LFDVPIGDKA ATDAVFAKAH AIAEINIVNP RIITNYMETR AVVAEYDAKR DHLTLTIGSQ GSHRLRDILC QTVLKIPVDK MRVICPDVGG GFGTKLFPYR EYALAGFAAR KLRRSVKWAA DRADHFVGDA QGRDNVTKAR MALSEDGKFL AMDVDLIGDM GAYLSTFGPY VPFGGAGMLP GLYDIKTFHC RVRTVFSNTV PVDAYRGAGR PEAAYVIERL VDAAARKLGM TPDAIRRKNF IPPRAMPYTT ATGKVYDSGD FAAHLKRAME VGNWKDFPRR AKAAKKQGLV RGIGLASYVE VCGTMGEETA NLRLDSNGDV TILIGTQSSG QGHQTAYAQI VAEQFGLQPE RVHIVQGDTD QIATGLGTGG SASIPSGGVA VERATRKLGA NLREIAADAL EAGAADLEIS DGTVRVAGTD RSISFADLAK RPGVDPAKLA TSDKFSSADG TYPNGTHLVE VEIDPATGKI AIVNYVIVDD FGVTLNPLLL AGQVHGGTMQ GIGQALMEQA VYDPQDGQLI TGSFMDYALP RAADGAPITF ETHNVPCKTN PLGVKGAGEA GAIGSCPAVV NAIIDGLWRD YHIDSIDMPA TPERVWMAIR DHERQHRL
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