Gene RPC_1420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1420 
Symbol 
ID3973071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1545511 
End bp1545993 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content64% 
IMG OID637924535 
ProductMaoC-like dehydratase 
Protein accessionYP_531301 
Protein GI90422931 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.788165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.585687 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTCT TCGAAGACCT CGTCATTGGT CAGCGCCGCG AGCTGGGGTC GTTCACATTT 
ACCGCCGAAT TGATCAAGGC ATTCGCCGAG CAATTCGATC CGCAGGCCTT TCATCTCGAC
GAAACCGCCG GGGAGCGATC ATTGTTCGGC GGGCTTGCGG CTTCCGGCTG GCATATCGGC
GCGGTCGGTA TGAAGCTGCT GGTGGCCGAT GGCGAGCGCC AGGCCGCCGA AGCGCTGGCG
CGGGGCGAAA CCCCCGCGGT GTGGGGACCG TCGCCGGGAT TTCGCGACTT GCGTTGGATC
AAGCCGGTGC TGGCGGGGGA CAGCATCAGC TTCGCCAGCA CGACCGAATC ACTGCGCAGG
TCGGAGTCGC GGCCGCAATG GGGAATCGTG CAAGCCCGCA ATACCGGGAC CAATCAGCGC
AACGAGCTGG TCTTCTCTTT TCTTGCCTCG GCTTTTGTGC CACGACGTGC ACCGGGGGCG
TGA
 
Protein sequence
MQFFEDLVIG QRRELGSFTF TAELIKAFAE QFDPQAFHLD ETAGERSLFG GLAASGWHIG 
AVGMKLLVAD GERQAAEALA RGETPAVWGP SPGFRDLRWI KPVLAGDSIS FASTTESLRR
SESRPQWGIV QARNTGTNQR NELVFSFLAS AFVPRRAPGA