Gene RPC_1419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1419 
Symbol 
ID3973070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1545046 
End bp1545501 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content67% 
IMG OID637924534 
ProductMaoC-like dehydratase 
Protein accessionYP_531300 
Protein GI90422930 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.982529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.60129 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTCA GCTTCGAAGA TTTCCCGCCC GGTCCTTTCG GCAGCTTCGG CCCGCGCCGC 
GTCAGCCGCG AGGAGATCAT CTCCTTTGCC GCGGAGTACG ATCCGCAGCC GATGCATCTC
GACGACGAAG CCGCCAAGCA CGGCATGCTG GGCGGGCTGT CGGGCTCCGG CTGGCACCTC
TGCGCACTGA TGATGCGGAT GCTGTGCGAC GGCTTTCTGT TGCGCACCGC CTCGCTCGGC
TCCCCCGGGG TCAACGAGCT GCGCTGGCTG TCGCCGCTGC GGCCCGACGA CGAATTGATG
CTGGACGTCG AGGTGATCCA GAGCCGGGTC TCCAACAGCC GCCCGGACAC CGGGATCGTC
ACCTTCGGCT GCCGGCTGCG CAACGCCGGC GGGCAGATCC TGCTTGAAGC CGTGACGCCC
ATCATTTTCA AGCGTCGCGA CTCGGATGCG GCATAG
 
Protein sequence
MTLSFEDFPP GPFGSFGPRR VSREEIISFA AEYDPQPMHL DDEAAKHGML GGLSGSGWHL 
CALMMRMLCD GFLLRTASLG SPGVNELRWL SPLRPDDELM LDVEVIQSRV SNSRPDTGIV
TFGCRLRNAG GQILLEAVTP IIFKRRDSDA A