Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1419 |
Symbol | |
ID | 3973070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1545046 |
End bp | 1545501 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637924534 |
Product | MaoC-like dehydratase |
Protein accession | YP_531300 |
Protein GI | 90422930 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2030] Acyl dehydratase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.982529 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.60129 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCTCA GCTTCGAAGA TTTCCCGCCC GGTCCTTTCG GCAGCTTCGG CCCGCGCCGC GTCAGCCGCG AGGAGATCAT CTCCTTTGCC GCGGAGTACG ATCCGCAGCC GATGCATCTC GACGACGAAG CCGCCAAGCA CGGCATGCTG GGCGGGCTGT CGGGCTCCGG CTGGCACCTC TGCGCACTGA TGATGCGGAT GCTGTGCGAC GGCTTTCTGT TGCGCACCGC CTCGCTCGGC TCCCCCGGGG TCAACGAGCT GCGCTGGCTG TCGCCGCTGC GGCCCGACGA CGAATTGATG CTGGACGTCG AGGTGATCCA GAGCCGGGTC TCCAACAGCC GCCCGGACAC CGGGATCGTC ACCTTCGGCT GCCGGCTGCG CAACGCCGGC GGGCAGATCC TGCTTGAAGC CGTGACGCCC ATCATTTTCA AGCGTCGCGA CTCGGATGCG GCATAG
|
Protein sequence | MTLSFEDFPP GPFGSFGPRR VSREEIISFA AEYDPQPMHL DDEAAKHGML GGLSGSGWHL CALMMRMLCD GFLLRTASLG SPGVNELRWL SPLRPDDELM LDVEVIQSRV SNSRPDTGIV TFGCRLRNAG GQILLEAVTP IIFKRRDSDA A
|
| |