Gene RPC_1412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1412 
Symbol 
ID3973063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1538883 
End bp1540010 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content67% 
IMG OID637924527 
Producthypothetical protein 
Protein accessionYP_531293 
Protein GI90422923 
COG category[S] Function unknown 
COG ID[COG1565] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00525557 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.308753 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGC CGTTCTCGCT TCAGGATGTC ATCAAGAAGC TGATCAAATC CGCCGGCCCG 
ATGCCGGTGT GGCGCTATAT GGAACTGTGC CTCACCCATC CGGAGTTCGG CTATTACGTC
TCCCGCGATC CGCTCGGCCG CGAGGGCGAC TTCACCACCG CGCCGGAAGT CAGCCAGATG
TTCGGCGAAT TGCTGGGATT GTGGGCGGCG TCGGTGTGGC GCTCGATCGG CTCGCCGCAA
TTGGTCCGGC TGATCGAGTT CGGCCCCGGG CGCGGCACCA TGATGGCGGA TGCGTTGCGC
GCGCTGCGGG TGGTACCGCC GCTGTTTCAG GCGCTGCACG TCCACCTGAT CGAGATCAAC
CCCGTGCTGC GCGAGAAACA GAAGGCGACG TTGGCGGGAG CCCAGAACCT GCATTGGCAC
GCCAGCCTCG ACGAGGTGCC GGGCGGCAGC ACGATCATCT TCGCCAACGA ATATTTCGAC
GTGCTGCCGA TCCACCAGAT GGTGCGCGGC GAACATGGCT GGCACGAGCG CACCGTGGAG
ATCGACGCCG CCGAGCGGCT GGTGTTCGGC GTGGCGCCGG AGCCGGTCCC GCATTTCGAG
CAGTTGCTGC CGCCCTTGGT CCGCGCCGCG CCGCAGGGCG CGGTGTTCGA ATGGCGGCCG
GATGCCGAGA TCATGAAGAT TGCCAGCCGG GTGCGCGACG AAGGCGGCGC GGCCTTGATC
ATTGATTATG GCCATCCGCG CAGCGACGCC GGCGACACCT TCCAGGCGAT CGCCCGGCAC
AGCTTTGCCG ATCCGTTGCA GAACCCCGGC CGCGCCGATG TCACCGCCCA TGTCGATTTC
CAGGCGCTGG CGCGCGGCGC GCAGGATGTC GGCGCCAGGG TGCACGGGCC GGTGACGCAG
GGCGAATTCC TCAAGCGGCT CGGAATCGAG AACCGCGCGG TGGCGTTGAT GGCCAAGGCC
AGCCTCGAAG TCTCAGAAGA CGTCGCCAGC GCGCTGAAGC GGCTGGTCGA GGGCGGCCGT
GGCGGCATGG GCTCGATGTT CAAGGTGATG GCGGTGTCGG AACCCGAGAT CGAGCAGATC
GCGGGCTTGA GCGACCAGCC CGAAGCCGCG CGGACCGCCG CGCAATGA
 
Protein sequence
MTEPFSLQDV IKKLIKSAGP MPVWRYMELC LTHPEFGYYV SRDPLGREGD FTTAPEVSQM 
FGELLGLWAA SVWRSIGSPQ LVRLIEFGPG RGTMMADALR ALRVVPPLFQ ALHVHLIEIN
PVLREKQKAT LAGAQNLHWH ASLDEVPGGS TIIFANEYFD VLPIHQMVRG EHGWHERTVE
IDAAERLVFG VAPEPVPHFE QLLPPLVRAA PQGAVFEWRP DAEIMKIASR VRDEGGAALI
IDYGHPRSDA GDTFQAIARH SFADPLQNPG RADVTAHVDF QALARGAQDV GARVHGPVTQ
GEFLKRLGIE NRAVALMAKA SLEVSEDVAS ALKRLVEGGR GGMGSMFKVM AVSEPEIEQI
AGLSDQPEAA RTAAQ