Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1412 |
Symbol | |
ID | 3973063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 1538883 |
End bp | 1540010 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637924527 |
Product | hypothetical protein |
Protein accession | YP_531293 |
Protein GI | 90422923 |
COG category | [S] Function unknown |
COG ID | [COG1565] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00525557 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.308753 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGAGC CGTTCTCGCT TCAGGATGTC ATCAAGAAGC TGATCAAATC CGCCGGCCCG ATGCCGGTGT GGCGCTATAT GGAACTGTGC CTCACCCATC CGGAGTTCGG CTATTACGTC TCCCGCGATC CGCTCGGCCG CGAGGGCGAC TTCACCACCG CGCCGGAAGT CAGCCAGATG TTCGGCGAAT TGCTGGGATT GTGGGCGGCG TCGGTGTGGC GCTCGATCGG CTCGCCGCAA TTGGTCCGGC TGATCGAGTT CGGCCCCGGG CGCGGCACCA TGATGGCGGA TGCGTTGCGC GCGCTGCGGG TGGTACCGCC GCTGTTTCAG GCGCTGCACG TCCACCTGAT CGAGATCAAC CCCGTGCTGC GCGAGAAACA GAAGGCGACG TTGGCGGGAG CCCAGAACCT GCATTGGCAC GCCAGCCTCG ACGAGGTGCC GGGCGGCAGC ACGATCATCT TCGCCAACGA ATATTTCGAC GTGCTGCCGA TCCACCAGAT GGTGCGCGGC GAACATGGCT GGCACGAGCG CACCGTGGAG ATCGACGCCG CCGAGCGGCT GGTGTTCGGC GTGGCGCCGG AGCCGGTCCC GCATTTCGAG CAGTTGCTGC CGCCCTTGGT CCGCGCCGCG CCGCAGGGCG CGGTGTTCGA ATGGCGGCCG GATGCCGAGA TCATGAAGAT TGCCAGCCGG GTGCGCGACG AAGGCGGCGC GGCCTTGATC ATTGATTATG GCCATCCGCG CAGCGACGCC GGCGACACCT TCCAGGCGAT CGCCCGGCAC AGCTTTGCCG ATCCGTTGCA GAACCCCGGC CGCGCCGATG TCACCGCCCA TGTCGATTTC CAGGCGCTGG CGCGCGGCGC GCAGGATGTC GGCGCCAGGG TGCACGGGCC GGTGACGCAG GGCGAATTCC TCAAGCGGCT CGGAATCGAG AACCGCGCGG TGGCGTTGAT GGCCAAGGCC AGCCTCGAAG TCTCAGAAGA CGTCGCCAGC GCGCTGAAGC GGCTGGTCGA GGGCGGCCGT GGCGGCATGG GCTCGATGTT CAAGGTGATG GCGGTGTCGG AACCCGAGAT CGAGCAGATC GCGGGCTTGA GCGACCAGCC CGAAGCCGCG CGGACCGCCG CGCAATGA
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Protein sequence | MTEPFSLQDV IKKLIKSAGP MPVWRYMELC LTHPEFGYYV SRDPLGREGD FTTAPEVSQM FGELLGLWAA SVWRSIGSPQ LVRLIEFGPG RGTMMADALR ALRVVPPLFQ ALHVHLIEIN PVLREKQKAT LAGAQNLHWH ASLDEVPGGS TIIFANEYFD VLPIHQMVRG EHGWHERTVE IDAAERLVFG VAPEPVPHFE QLLPPLVRAA PQGAVFEWRP DAEIMKIASR VRDEGGAALI IDYGHPRSDA GDTFQAIARH SFADPLQNPG RADVTAHVDF QALARGAQDV GARVHGPVTQ GEFLKRLGIE NRAVALMAKA SLEVSEDVAS ALKRLVEGGR GGMGSMFKVM AVSEPEIEQI AGLSDQPEAA RTAAQ
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