| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1394 |
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| Symbol | |
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| ID | 3973315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1520927 |
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| End bp | 1521499 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637924509 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_531275 |
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| Protein GI | 90422905 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.660722 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.96884 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTCCCC GCCTGCGCGG GGACGACGCC TCGTTGTGGT GCGGTGGCGT TCGGTCCCTT
CGGAAGCCGG GCACCATGAG CCGCCACCTC CGCGCCGGGC TGATCGCCGC CGTCGCCGCG
CTGGCGCTCG ACCAGGCGGT GAAGCTGTGG CTGCTCTATG GCTACGAGCT CGGCCGCCGT
GGCGCGGTCA GGCTGGCGCC GTTCTTCGAC ATGGTGCTGG CCTGGAACAC CGGCATCAGC
TACGGCTGGT TCTCCGAGAC CGGGCCCACC GGGCAGGCGA TCATGCTGGC GTTCAAGGCG
GTGGCGGTGG TGGTGCTGGC GATCTGGATG GCGCGCTCGG GAACCCTGTT GGCGACCATC
GCGCTGGGGC TGATCATCGG CGGCGCGATC GGCAACGGCA TCGACCGGCT GGCCTATGGC
GCGGTGGTGG ATTTCGCGCT TTTGCACCTC GAAATCGCCG GCAAGACCTA CAACTGGTAC
GTGTTTAACC TTGCCGACGT GGCGATCGTT GCCGGGGTCG GAGGCCTGCT GTATGACTCC
TTCTTCGGCC AACCCGCCGT AAAAGCGCCC TGA
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| Protein sequence | MGPRLRGDDA SLWCGGVRSL RKPGTMSRHL RAGLIAAVAA LALDQAVKLW LLYGYELGRR
GAVRLAPFFD MVLAWNTGIS YGWFSETGPT GQAIMLAFKA VAVVVLAIWM ARSGTLLATI
ALGLIIGGAI GNGIDRLAYG AVVDFALLHL EIAGKTYNWY VFNLADVAIV AGVGGLLYDS
FFGQPAVKAP
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