| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1374 |
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| Symbol | |
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| ID | 3972470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1499300 |
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| End bp | 1500481 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637924489 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_531255 |
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| Protein GI | 90422885 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCCCGA TTTCGCTTGT CGCTGCCGCT GCGGTGGCGC TGACCGCCGC CGCGGCCCAT
GCCGACGATC TCAAGATCGC GCTGATCTAC GGCAAGACCG GACCGCTGGA AGCCTACGCC
AAGCAGACCG AGACCGGGCT GCGGCTCGGC TTCGAATACG CCACCAAAGG CAGCATGACG
GTCGACGGCC GCAAAATCGT GATCATCACC AAGGACGACC AGAGTAAGCC GGATCTCTCC
AAGGCGGCGC TCGCCGAAGC CTATCAGGAC GACGGCGCCG ACATCGCGAT CGGCTCGACC
TCCTCGGCGG CGGCGCTGGC CGACCTGCCG GTCGCGGAAG AGAACAAGAA GATTTTGATC
GTCGAGCCGG CGGTCGCCGA TCAGATCACC GGCGAAAAGT GGAACCGCTA CATCTTCCGC
ACCGGCCGCA ATTCCTCGCA GGACGCGATC GCCAACGCGG TGGCGATCGG CAAGCCCGGC
GTCACCATCG CCACGCTCGG CCAGGACTAC GCGTTCGGCC GCGACGGCGT CGCCGCCTTC
AAGGCGGCAC TCGCCAAGAC CGGCGCGACG CTGGCGGCGG AAGAATACGT GCCCACCACC
ACCACCGATT TCACCGCCGC CGGGCAGCGG CTGTTCGACG CGCTGAAGGA CAAGCCCGGC
AAGAAGATCA TCTGGGTGAT CTGGGCCGGC GGCGGCGATC CCTTGACCAA GCTGCAGGAC
ATGGACCCGA AGCGCTACGG CATCGAGCTG TCCACCGGCG GCAACATTCT TCCCGCGCTC
GCCGCCTATA AGCGGCTGCC CGGCATGGAG GGCGCCACTT ATTATTACTA CGACATCCCG
AAGAACCCGG TGAACGACTG GCTGGTCGCC GAGCACCAGA AGCGCTTCAA AGCGCCGCCG
GATTTCTTCA CCGCCGGCGG CTTCGCCGCG GCGATGGCGA CGGTGGCGGC CGTCACCAAG
GCGAAGTCCA CCGACACCGA GAAGCTGATC GCCGCGATGG AGGGGCTCGA ATTCGACACC
CCAAAAGGAA GAATGATCTT CCGCAAGGAG GATCATCAGG CGCTGCAGAG CATGTATCAC
TTCAAGGTCA AGGTCGATCC GGAGCTGGCC TGGGCGGTCA ACGAGCCGGT GCGCGAGATC
AAGATCGAGG ACATGGACAT CCCGATCCGC AACAAGCGGT GA
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| Protein sequence | MRPISLVAAA AVALTAAAAH ADDLKIALIY GKTGPLEAYA KQTETGLRLG FEYATKGSMT
VDGRKIVIIT KDDQSKPDLS KAALAEAYQD DGADIAIGST SSAAALADLP VAEENKKILI
VEPAVADQIT GEKWNRYIFR TGRNSSQDAI ANAVAIGKPG VTIATLGQDY AFGRDGVAAF
KAALAKTGAT LAAEEYVPTT TTDFTAAGQR LFDALKDKPG KKIIWVIWAG GGDPLTKLQD
MDPKRYGIEL STGGNILPAL AAYKRLPGME GATYYYYDIP KNPVNDWLVA EHQKRFKAPP
DFFTAGGFAA AMATVAAVTK AKSTDTEKLI AAMEGLEFDT PKGRMIFRKE DHQALQSMYH
FKVKVDPELA WAVNEPVREI KIEDMDIPIR NKR
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